Protein–RNA interactions for Protein: P47098

TY1B-JR1, Transposon Ty1-JR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR1P47098 HIT1YJR055W 495 nt1.8□□□□□ -2.12
TY1B-JR1P47098 SUR1YPL057C 1149 nt1.8□□□□□ -2.12
TY1B-JR1P47098 RIX1YHR197W 2292 nt1.8□□□□□ -2.12
TY1B-JR1P47098 YPK3YBR028C 1578 nt1.79□□□□□ -2.12
TY1B-JR1P47098 LIP2YLR239C 987 nt1.79□□□□□ -2.12
TY1B-JR1P47098 TRM112YNR046W 408 nt1.79□□□□□ -2.12
TY1B-JR1P47098 IOC4YMR044W 1428 nt1.79□□□□□ -2.12
TY1B-JR1P47098 HFM1YGL251C 3564 nt1.78□□□□□ -2.12
TY1B-JR1P47098 KEI1YDR367W 666 nt1.78□□□□□ -2.12
TY1B-JR1P47098 MES1YGR264C 2256 nt1.78□□□□□ -2.12
TY1B-JR1P47098 VHR1YIL056W 1923 nt1.78□□□□□ -2.12
TY1B-JR1P47098 YJL070CYJL070C 2667 nt1.78□□□□□ -2.12
TY1B-JR1P47098 SPC3YLR066W 555 nt1.77□□□□□ -2.13
TY1B-JR1P47098 BEM2YER155C 6504 nt1.77□□□□□ -2.13
TY1B-JR1P47098 PET309YLR067C 2898 nt1.76□□□□□ -2.13
TY1B-JR1P47098 tV(UAC)BtV(UAC)B 74 nt1.76□□□□□ -2.13
TY1B-JR1P47098 tV(UAC)DtV(UAC)D 74 nt1.76□□□□□ -2.13
TY1B-JR1P47098 YIL166CYIL166C 1629 nt1.75□□□□□ -2.13
TY1B-JR1P47098 VMA10YHR039C-A 345 nt1.75□□□□□ -2.13
TY1B-JR1P47098 MET18YIL128W 3099 nt1.75□□□□□ -2.13
TY1B-JR1P47098 NPR1YNL183C 2373 nt1.75□□□□□ -2.13
TY1B-JR1P47098 YEL1YBL060W 2064 nt1.75□□□□□ -2.13
TY1B-JR1P47098 TIM9YEL020W-A 264 nt1.75□□□□□ -2.13
TY1B-JR1P47098 YER085CYER085C 522 nt1.75□□□□□ -2.13
TY1B-JR1P47098 RRP42YDL111C 798 nt1.74□□□□□ -2.13
TY1B-JR1P47098 PPE1YHR075C 1203 nt1.74□□□□□ -2.13
TY1B-JR1P47098 YOL162WYOL162W 648 nt1.74□□□□□ -2.13
TY1B-JR1P47098 MRE11YMR224C 2079 nt1.73□□□□□ -2.13
TY1B-JR1P47098 IPT1YDR072C 1584 nt1.73□□□□□ -2.13
TY1B-JR1P47098 ARP10YDR106W 855 nt1.73□□□□□ -2.13
TY1B-JR1P47098 OST5YGL226C-A 261 nt1.73□□□□□ -2.13
TY1B-JR1P47098 MCT1YOR221C 1083 nt1.73□□□□□ -2.13
TY1B-JR1P47098 URB2YJR041C 3525 nt1.73□□□□□ -2.13
TY1B-JR1P47098 RIF1YBR275C 5751 nt1.73□□□□□ -2.13
TY1B-JR1P47098 RRP8YDR083W 1179 nt1.72□□□□□ -2.13
TY1B-JR1P47098 YGL069CYGL069C 465 nt1.72□□□□□ -2.13
TY1B-JR1P47098 YGL117WYGL117W 798 nt1.72□□□□□ -2.13
TY1B-JR1P47098 SLM4YBR077C 489 nt1.72□□□□□ -2.13
TY1B-JR1P47098 RPN5YDL147W 1338 nt1.72□□□□□ -2.13
TY1B-JR1P47098 CDC25YLR310C 4770 nt1.72□□□□□ -2.13
TY1B-JR1P47098 SPS2YDR522C 1509 nt1.72□□□□□ -2.13
TY1B-JR1P47098 tT(UGU)HtT(UGU)H 72 nt1.72□□□□□ -2.13
TY1B-JR1P47098 HCH1YNL281W 462 nt1.72□□□□□ -2.13
TY1B-JR1P47098 PRP16YKR086W 3216 nt1.71□□□□□ -2.14
TY1B-JR1P47098 YGR160WYGR160W 612 nt1.71□□□□□ -2.14
TY1B-JR1P47098 YNL046WYNL046W 519 nt1.71□□□□□ -2.14
TY1B-JR1P47098 PUF2YPR042C 3228 nt1.71□□□□□ -2.14
TY1B-JR1P47098 CBP6YBR120C 489 nt1.71□□□□□ -2.14
TY1B-JR1P47098 SPE1YKL184W 1401 nt1.7□□□□□ -2.14
TY1B-JR1P47098 RAV2YDR202C 1056 nt1.7□□□□□ -2.14
TY1B-JR1P47098 SUB1YMR039C 879 nt1.7□□□□□ -2.14
TY1B-JR1P47098 INP1YMR204C 1263 nt1.7□□□□□ -2.14
TY1B-JR1P47098 ENP2YGR145W 2124 nt1.7□□□□□ -2.14
TY1B-JR1P47098 DIA2YOR080W 2199 nt1.7□□□□□ -2.14
TY1B-JR1P47098 YHR097CYHR097C 1101 nt1.7□□□□□ -2.14
TY1B-JR1P47098 SVS1YPL163C 783 nt1.7□□□□□ -2.14
TY1B-JR1P47098 HKR1YDR420W 5409 nt1.69□□□□□ -2.14
TY1B-JR1P47098 YDR461C-AYDR461C-A 243 nt1.69□□□□□ -2.14
TY1B-JR1P47098 YGR242WYGR242W 309 nt1.69□□□□□ -2.14
TY1B-JR1P47098 DFG16YOR030W 1860 nt1.69□□□□□ -2.14
TY1B-JR1P47098 YMR1YJR110W 2067 nt1.68□□□□□ -2.14
TY1B-JR1P47098 MIG2YGL209W 1149 nt1.68□□□□□ -2.14
TY1B-JR1P47098 RNA1YMR235C 1224 nt1.68□□□□□ -2.14
TY1B-JR1P47098 PHO5YBR093C 1404 nt1.68□□□□□ -2.14
TY1B-JR1P47098 RTT105YER104W 627 nt1.67□□□□□ -2.14
TY1B-JR1P47098 MSL1YIR009W 336 nt1.67□□□□□ -2.14
TY1B-JR1P47098 YPL071CYPL071C 471 nt1.67□□□□□ -2.14
TY1B-JR1P47098 YSP1YHR155W 3687 nt1.67□□□□□ -2.14
TY1B-JR1P47098 IST2YBR086C 2841 nt1.67□□□□□ -2.14
TY1B-JR1P47098 MED1YPR070W 1701 nt1.67□□□□□ -2.14
TY1B-JR1P47098 YKR011CYKR011C 1062 nt1.67□□□□□ -2.14
TY1B-JR1P47098 HTD2YHR067W 843 nt1.66□□□□□ -2.14
TY1B-JR1P47098 RPS0BYLR048W 759 nt1.66□□□□□ -2.14
TY1B-JR1P47098 UTP6YDR449C 1323 nt1.66□□□□□ -2.14
TY1B-JR1P47098 NOP56YLR197W 1515 nt1.66□□□□□ -2.14
TY1B-JR1P47098 RKM1YPL208W 1752 nt1.66□□□□□ -2.14
TY1B-JR1P47098 FMP16YDR070C 282 nt1.65□□□□□ -2.14
TY1B-JR1P47098 YDR115WYDR115W 318 nt1.65□□□□□ -2.14
TY1B-JR1P47098 FMC1YIL098C 468 nt1.65□□□□□ -2.14
TY1B-JR1P47098 PAM16YJL104W 450 nt1.65□□□□□ -2.14
TY1B-JR1P47098 YNL203CYNL203C 612 nt1.65□□□□□ -2.14
TY1B-JR1P47098 RLF2YPR018W 1821 nt1.65□□□□□ -2.15
TY1B-JR1P47098 PEX14YGL153W 1026 nt1.64□□□□□ -2.15
TY1B-JR1P47098 ULP2YIL031W 3105 nt1.64□□□□□ -2.15
TY1B-JR1P47098 MAD1YGL086W 2250 nt1.64□□□□□ -2.15
TY1B-JR1P47098 GAS2YLR343W 1668 nt1.64□□□□□ -2.15
TY1B-JR1P47098 UBP16YPL072W 1500 nt1.64□□□□□ -2.15
TY1B-JR1P47098 YIR017W-AYIR017W-A 600 nt1.64□□□□□ -2.15
TY1B-JR1P47098 YIR043CYIR043C 693 nt1.64□□□□□ -2.15
TY1B-JR1P47098 YLR416CYLR416C 399 nt1.64□□□□□ -2.15
TY1B-JR1P47098 YPR078CYPR078C 1119 nt1.64□□□□□ -2.15
TY1B-JR1P47098 MAK5YBR142W 2322 nt1.63□□□□□ -2.15
TY1B-JR1P47098 UTP25YIL091C 2166 nt1.63□□□□□ -2.15
TY1B-JR1P47098 ALE1YOR175C 1860 nt1.63□□□□□ -2.15
TY1B-JR1P47098 SRO9YCL037C 1305 nt1.63□□□□□ -2.15
TY1B-JR1P47098 YER067C-AYER067C-A 324 nt1.63□□□□□ -2.15
TY1B-JR1P47098 MYO2YOR326W 4725 nt1.63□□□□□ -2.15
TY1B-JR1P47098 ALG11YNL048W 1647 nt1.63□□□□□ -2.15
TY1B-JR1P47098 FIR1YER032W 2631 nt1.62□□□□□ -2.15
TY1B-JR1P47098 VMR1YHL035C 4779 nt1.62□□□□□ -2.15
Retrieved 100 of 7,029 protein–RNA pairs in 46.8 ms