Protein–RNA interactions for Protein: P43234

CTSO, Cathepsin O, humanhuman

Predicted RBP Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSOP43234 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.14■□□□□ 0.97
CTSOP43234 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CTSOP43234 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.14■□□□□ 0.97
CTSOP43234 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.14■□□□□ 0.97
CTSOP43234 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
CTSOP43234 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CTSOP43234 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTSOP43234 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CTSOP43234 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.14■□□□□ 0.97
CTSOP43234 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
CTSOP43234 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTSOP43234 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTSOP43234 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTSOP43234 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CTSOP43234 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTSOP43234 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CTSOP43234 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTSOP43234 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTSOP43234 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.13■□□□□ 0.97
CTSOP43234 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CTSOP43234 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTSOP43234 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTSOP43234 AC244015.2-201ENST00000616358 1861 ntBASIC21.13■□□□□ 0.97
CTSOP43234 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTSOP43234 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTSOP43234 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTSOP43234 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTSOP43234 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CTSOP43234 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTSOP43234 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTSOP43234 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.12■□□□□ 0.97
CTSOP43234 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.12■□□□□ 0.97
CTSOP43234 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CTSOP43234 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTSOP43234 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTSOP43234 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.12■□□□□ 0.97
CTSOP43234 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTSOP43234 AL355472.2-201ENST00000422958 438 ntBASIC21.12■□□□□ 0.97
CTSOP43234 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.12■□□□□ 0.97
CTSOP43234 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.12■□□□□ 0.97
CTSOP43234 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.12■□□□□ 0.97
CTSOP43234 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.12■□□□□ 0.97
CTSOP43234 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTSOP43234 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CTSOP43234 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTSOP43234 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.12■□□□□ 0.97
CTSOP43234 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.12■□□□□ 0.97
CTSOP43234 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CTSOP43234 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTSOP43234 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTSOP43234 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CTSOP43234 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTSOP43234 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CTSOP43234 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.11■□□□□ 0.97
CTSOP43234 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTSOP43234 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CTSOP43234 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTSOP43234 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTSOP43234 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTSOP43234 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CTSOP43234 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CTSOP43234 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.11■□□□□ 0.97
CTSOP43234 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.11■□□□□ 0.97
CTSOP43234 MIR4758-201ENST00000577688 71 ntBASIC21.11■□□□□ 0.97
CTSOP43234 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
CTSOP43234 FAM21FP-204ENST00000608637 956 ntBASIC21.11■□□□□ 0.97
CTSOP43234 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.11■□□□□ 0.97
CTSOP43234 AC133041.1-202ENST00000642053 222 ntBASIC21.11■□□□□ 0.97
CTSOP43234 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTSOP43234 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CTSOP43234 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.11■□□□□ 0.97
CTSOP43234 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CTSOP43234 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.11■□□□□ 0.97
CTSOP43234 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CTSOP43234 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CTSOP43234 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.11■□□□□ 0.97
CTSOP43234 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CTSOP43234 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.1■□□□□ 0.97
CTSOP43234 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTSOP43234 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTSOP43234 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.1■□□□□ 0.97
CTSOP43234 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.1■□□□□ 0.97
CTSOP43234 CDV3P1-201ENST00000471403 739 ntBASIC21.1■□□□□ 0.97
CTSOP43234 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CTSOP43234 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.1■□□□□ 0.97
CTSOP43234 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.1■□□□□ 0.97
CTSOP43234 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CTSOP43234 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CTSOP43234 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CTSOP43234 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTSOP43234 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTSOP43234 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.09■□□□□ 0.97
CTSOP43234 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.09■□□□□ 0.97
CTSOP43234 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTSOP43234 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.09■□□□□ 0.97
CTSOP43234 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTSOP43234 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CTSOP43234 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTSOP43234 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.09■□□□□ 0.97
CTSOP43234 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms