Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.66■□□□□ 0.74
CDKN2CP42773 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDKN2CP42773 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDKN2CP42773 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.66■□□□□ 0.74
CDKN2CP42773 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDKN2CP42773 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CDKN2CP42773 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDKN2CP42773 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDKN2CP42773 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.65■□□□□ 0.74
CDKN2CP42773 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDKN2CP42773 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDKN2CP42773 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDKN2CP42773 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.65■□□□□ 0.74
CDKN2CP42773 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDKN2CP42773 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.65■□□□□ 0.74
CDKN2CP42773 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDKN2CP42773 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.65■□□□□ 0.74
CDKN2CP42773 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.65■□□□□ 0.74
CDKN2CP42773 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.65■□□□□ 0.74
CDKN2CP42773 AL136967.2-201ENST00000623968 743 ntBASIC19.65■□□□□ 0.74
CDKN2CP42773 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.65■□□□□ 0.74
CDKN2CP42773 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
CDKN2CP42773 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDKN2CP42773 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
CDKN2CP42773 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CDKN2CP42773 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDKN2CP42773 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDKN2CP42773 AC007225.1-201ENST00000566331 1836 ntBASIC19.65■□□□□ 0.74
CDKN2CP42773 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
CDKN2CP42773 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CDKN2CP42773 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.64■□□□□ 0.74
CDKN2CP42773 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDKN2CP42773 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDKN2CP42773 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDKN2CP42773 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.64■□□□□ 0.73
CDKN2CP42773 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.64■□□□□ 0.73
CDKN2CP42773 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.64■□□□□ 0.73
CDKN2CP42773 EEF1DP3-203ENST00000566025 782 ntBASIC19.64■□□□□ 0.73
CDKN2CP42773 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.64■□□□□ 0.73
CDKN2CP42773 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.64■□□□□ 0.73
CDKN2CP42773 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.64■□□□□ 0.73
CDKN2CP42773 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDKN2CP42773 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDKN2CP42773 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDKN2CP42773 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDKN2CP42773 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.63■□□□□ 0.73
CDKN2CP42773 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDKN2CP42773 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDKN2CP42773 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
CDKN2CP42773 AC061975.6-201ENST00000579045 1553 ntBASIC19.63■□□□□ 0.73
CDKN2CP42773 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.63■□□□□ 0.73
CDKN2CP42773 AC091305.1-201ENST00000479476 895 ntBASIC19.63■□□□□ 0.73
CDKN2CP42773 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.63■□□□□ 0.73
CDKN2CP42773 AC012414.1-201ENST00000556676 535 ntBASIC19.63■□□□□ 0.73
CDKN2CP42773 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDKN2CP42773 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDKN2CP42773 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDKN2CP42773 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDKN2CP42773 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDKN2CP42773 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDKN2CP42773 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.62■□□□□ 0.73
CDKN2CP42773 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDKN2CP42773 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDKN2CP42773 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.62■□□□□ 0.73
CDKN2CP42773 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.62■□□□□ 0.73
CDKN2CP42773 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDKN2CP42773 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDKN2CP42773 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CDKN2CP42773 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDKN2CP42773 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDKN2CP42773 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CDKN2CP42773 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CDKN2CP42773 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDKN2CP42773 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDKN2CP42773 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
CDKN2CP42773 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDKN2CP42773 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
CDKN2CP42773 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.61■□□□□ 0.73
CDKN2CP42773 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDKN2CP42773 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CDKN2CP42773 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.61■□□□□ 0.73
CDKN2CP42773 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CDKN2CP42773 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDKN2CP42773 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDKN2CP42773 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.61■□□□□ 0.73
CDKN2CP42773 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDKN2CP42773 AC053503.5-201ENST00000601508 636 ntBASIC19.61■□□□□ 0.73
CDKN2CP42773 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDKN2CP42773 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.61■□□□□ 0.73
CDKN2CP42773 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CDKN2CP42773 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDKN2CP42773 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
CDKN2CP42773 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDKN2CP42773 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
CDKN2CP42773 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDKN2CP42773 PCDHAC2-203ENST00000615316 3011 ntBASIC19.6■□□□□ 0.73
CDKN2CP42773 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CDKN2CP42773 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDKN2CP42773 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDKN2CP42773 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms