Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 PKD1P6-201ENST00000343738 4769 ntBASIC19.76■□□□□ 0.75
RORAP35398 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RORAP35398 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RORAP35398 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RORAP35398 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RORAP35398 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.76■□□□□ 0.75
RORAP35398 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.76■□□□□ 0.75
RORAP35398 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.76■□□□□ 0.75
RORAP35398 AC092118.2-201ENST00000613495 667 ntBASIC19.76■□□□□ 0.75
RORAP35398 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RORAP35398 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RORAP35398 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
RORAP35398 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RORAP35398 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RORAP35398 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.75■□□□□ 0.75
RORAP35398 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.75■□□□□ 0.75
RORAP35398 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.75■□□□□ 0.75
RORAP35398 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
RORAP35398 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.75■□□□□ 0.75
RORAP35398 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.75■□□□□ 0.75
RORAP35398 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.75■□□□□ 0.75
RORAP35398 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RORAP35398 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RORAP35398 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
RORAP35398 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.75■□□□□ 0.75
RORAP35398 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RORAP35398 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RORAP35398 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.75■□□□□ 0.75
RORAP35398 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RORAP35398 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RORAP35398 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.75■□□□□ 0.75
RORAP35398 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RORAP35398 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RORAP35398 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RORAP35398 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RORAP35398 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RORAP35398 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RORAP35398 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.74■□□□□ 0.75
RORAP35398 AC091799.1-201ENST00000422823 811 ntBASIC19.74■□□□□ 0.75
RORAP35398 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RORAP35398 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.74■□□□□ 0.75
RORAP35398 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RORAP35398 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RORAP35398 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.73■□□□□ 0.75
RORAP35398 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RORAP35398 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.73■□□□□ 0.75
RORAP35398 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RORAP35398 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.73■□□□□ 0.75
RORAP35398 AC245052.3-201ENST00000450182 901 ntBASIC19.73■□□□□ 0.75
RORAP35398 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RORAP35398 AC010980.2-201ENST00000587099 1412 ntBASIC19.73■□□□□ 0.75
RORAP35398 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RORAP35398 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.73■□□□□ 0.75
RORAP35398 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.73■□□□□ 0.75
RORAP35398 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RORAP35398 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
RORAP35398 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.73■□□□□ 0.75
RORAP35398 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
RORAP35398 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RORAP35398 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RORAP35398 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RORAP35398 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RORAP35398 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RORAP35398 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.72■□□□□ 0.75
RORAP35398 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RORAP35398 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.72■□□□□ 0.75
RORAP35398 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RORAP35398 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RORAP35398 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RORAP35398 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.72■□□□□ 0.75
RORAP35398 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RORAP35398 BX276092.2-201ENST00000417668 665 ntBASIC19.72■□□□□ 0.75
RORAP35398 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.72■□□□□ 0.75
RORAP35398 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.72■□□□□ 0.75
RORAP35398 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RORAP35398 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RORAP35398 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RORAP35398 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RORAP35398 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.72■□□□□ 0.75
RORAP35398 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RORAP35398 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RORAP35398 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RORAP35398 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RORAP35398 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
RORAP35398 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RORAP35398 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.71■□□□□ 0.75
RORAP35398 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RORAP35398 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RORAP35398 TSPY20P-201ENST00000450910 630 ntBASIC19.71■□□□□ 0.75
RORAP35398 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RORAP35398 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
RORAP35398 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RORAP35398 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RORAP35398 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RORAP35398 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RORAP35398 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RORAP35398 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RORAP35398 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
RORAP35398 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RORAP35398 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms