Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.03■□□□□ 0.64
SHC1P29353 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
SHC1P29353 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SHC1P29353 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHC1P29353 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHC1P29353 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.02■□□□□ 0.64
SHC1P29353 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.02■□□□□ 0.64
SHC1P29353 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHC1P29353 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.02■□□□□ 0.64
SHC1P29353 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.02■□□□□ 0.63
SHC1P29353 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SHC1P29353 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
SHC1P29353 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.01■□□□□ 0.63
SHC1P29353 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.01■□□□□ 0.63
SHC1P29353 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SHC1P29353 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.01■□□□□ 0.63
SHC1P29353 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.01■□□□□ 0.63
SHC1P29353 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHC1P29353 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SHC1P29353 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHC1P29353 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.01■□□□□ 0.63
SHC1P29353 AC138907.5-202ENST00000569484 235 ntBASIC19.01■□□□□ 0.63
SHC1P29353 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHC1P29353 AP001160.3-201ENST00000601484 763 ntBASIC19.01■□□□□ 0.63
SHC1P29353 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHC1P29353 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SHC1P29353 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.01■□□□□ 0.63
SHC1P29353 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHC1P29353 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.01■□□□□ 0.63
SHC1P29353 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHC1P29353 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHC1P29353 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHC1P29353 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19■□□□□ 0.63
SHC1P29353 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHC1P29353 KRT19P1-201ENST00000405746 1186 ntBASIC19■□□□□ 0.63
SHC1P29353 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19■□□□□ 0.63
SHC1P29353 AC010141.2-201ENST00000452426 721 ntBASIC19■□□□□ 0.63
SHC1P29353 AC022517.1-201ENST00000592429 346 ntBASIC19■□□□□ 0.63
SHC1P29353 IKBKGP1-201ENST00000612193 1073 ntBASIC19■□□□□ 0.63
SHC1P29353 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19■□□□□ 0.63
SHC1P29353 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHC1P29353 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHC1P29353 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SHC1P29353 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19■□□□□ 0.63
SHC1P29353 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19■□□□□ 0.63
SHC1P29353 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19■□□□□ 0.63
SHC1P29353 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.99■□□□□ 0.63
SHC1P29353 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHC1P29353 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHC1P29353 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SHC1P29353 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SHC1P29353 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SHC1P29353 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
SHC1P29353 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHC1P29353 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHC1P29353 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHC1P29353 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.99■□□□□ 0.63
SHC1P29353 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
SHC1P29353 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.99■□□□□ 0.63
SHC1P29353 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.99■□□□□ 0.63
SHC1P29353 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHC1P29353 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.99■□□□□ 0.63
SHC1P29353 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.99■□□□□ 0.63
SHC1P29353 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.99■□□□□ 0.63
SHC1P29353 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.99■□□□□ 0.63
SHC1P29353 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.99■□□□□ 0.63
SHC1P29353 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SHC1P29353 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.99■□□□□ 0.63
SHC1P29353 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHC1P29353 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SHC1P29353 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.99■□□□□ 0.63
SHC1P29353 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHC1P29353 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SHC1P29353 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHC1P29353 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHC1P29353 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.99■□□□□ 0.63
SHC1P29353 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.98■□□□□ 0.63
SHC1P29353 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHC1P29353 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHC1P29353 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SHC1P29353 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.98■□□□□ 0.63
SHC1P29353 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SHC1P29353 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.98■□□□□ 0.63
SHC1P29353 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
SHC1P29353 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.98■□□□□ 0.63
SHC1P29353 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SHC1P29353 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHC1P29353 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHC1P29353 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SHC1P29353 AC061975.6-201ENST00000579045 1553 ntBASIC18.98■□□□□ 0.63
SHC1P29353 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHC1P29353 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
SHC1P29353 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHC1P29353 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.97■□□□□ 0.63
SHC1P29353 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHC1P29353 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SHC1P29353 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHC1P29353 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.97■□□□□ 0.63
SHC1P29353 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHC1P29353 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms