Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTPN3P26045 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
PTPN3P26045 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.2■□□□□ 0.98
PTPN3P26045 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.2■□□□□ 0.98
PTPN3P26045 AC006128.1-201ENST00000624704 1661 ntBASIC21.2■□□□□ 0.98
PTPN3P26045 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.2■□□□□ 0.98
PTPN3P26045 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
PTPN3P26045 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTPN3P26045 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTPN3P26045 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPN3P26045 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPN3P26045 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PTPN3P26045 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
PTPN3P26045 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPN3P26045 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPN3P26045 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PTPN3P26045 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPN3P26045 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPN3P26045 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.19■□□□□ 0.98
PTPN3P26045 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPN3P26045 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPN3P26045 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
PTPN3P26045 KRT19P1-201ENST00000405746 1186 ntBASIC21.19■□□□□ 0.98
PTPN3P26045 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.19■□□□□ 0.98
PTPN3P26045 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PTPN3P26045 KRT18P20-201ENST00000548986 1279 ntBASIC21.19■□□□□ 0.98
PTPN3P26045 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.19■□□□□ 0.98
PTPN3P26045 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPN3P26045 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPN3P26045 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.19■□□□□ 0.98
PTPN3P26045 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPN3P26045 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.18■□□□□ 0.98
PTPN3P26045 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPN3P26045 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPN3P26045 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPN3P26045 AC026271.2-201ENST00000428091 497 ntBASIC21.18■□□□□ 0.98
PTPN3P26045 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.18■□□□□ 0.98
PTPN3P26045 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.18■□□□□ 0.98
PTPN3P26045 NTF6G-201ENST00000591094 616 ntBASIC21.18■□□□□ 0.98
PTPN3P26045 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPN3P26045 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPN3P26045 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPN3P26045 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.18■□□□□ 0.98
PTPN3P26045 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PTPN3P26045 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PTPN3P26045 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
PTPN3P26045 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTPN3P26045 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTPN3P26045 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTPN3P26045 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PTPN3P26045 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.17■□□□□ 0.98
PTPN3P26045 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.17■□□□□ 0.98
PTPN3P26045 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTPN3P26045 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.17■□□□□ 0.98
PTPN3P26045 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.17■□□□□ 0.98
PTPN3P26045 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTPN3P26045 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PTPN3P26045 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTPN3P26045 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PTPN3P26045 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTPN3P26045 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PTPN3P26045 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN3P26045 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN3P26045 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.16■□□□□ 0.98
PTPN3P26045 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN3P26045 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN3P26045 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN3P26045 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.16■□□□□ 0.98
PTPN3P26045 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN3P26045 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN3P26045 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN3P26045 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
PTPN3P26045 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.16■□□□□ 0.98
PTPN3P26045 AC245052.3-201ENST00000450182 901 ntBASIC21.16■□□□□ 0.98
PTPN3P26045 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.16■□□□□ 0.98
PTPN3P26045 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
PTPN3P26045 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPN3P26045 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.16■□□□□ 0.98
PTPN3P26045 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
PTPN3P26045 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN3P26045 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.15■□□□□ 0.98
PTPN3P26045 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.15■□□□□ 0.98
PTPN3P26045 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN3P26045 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN3P26045 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.15■□□□□ 0.98
PTPN3P26045 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN3P26045 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN3P26045 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.15■□□□□ 0.98
PTPN3P26045 RARRES2P6-201ENST00000567333 442 ntBASIC21.15■□□□□ 0.98
PTPN3P26045 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN3P26045 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.15■□□□□ 0.98
PTPN3P26045 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.15■□□□□ 0.98
PTPN3P26045 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN3P26045 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN3P26045 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN3P26045 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN3P26045 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN3P26045 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PTPN3P26045 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
PTPN3P26045 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms