Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP24386 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP24386 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.38■□□□□ 0.69
CHMP24386 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.38■□□□□ 0.69
CHMP24386 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP24386 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CHMP24386 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP24386 FEM1AP1-201ENST00000431297 1995 ntBASIC19.38■□□□□ 0.69
CHMP24386 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP24386 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP24386 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.38■□□□□ 0.69
CHMP24386 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP24386 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CHMP24386 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP24386 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CHMP24386 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.37■□□□□ 0.69
CHMP24386 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP24386 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP24386 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP24386 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.37■□□□□ 0.69
CHMP24386 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CHMP24386 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP24386 RNF165-205ENST00000588679 2904 ntBASIC19.37■□□□□ 0.69
CHMP24386 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP24386 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP24386 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.37■□□□□ 0.69
CHMP24386 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.37■□□□□ 0.69
CHMP24386 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.37■□□□□ 0.69
CHMP24386 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP24386 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP24386 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP24386 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP24386 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CHMP24386 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CHMP24386 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP24386 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.36■□□□□ 0.69
CHMP24386 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP24386 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP24386 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP24386 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP24386 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP24386 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP24386 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
CHMP24386 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.36■□□□□ 0.69
CHMP24386 AC079140.4-201ENST00000507448 529 ntBASIC19.36■□□□□ 0.69
CHMP24386 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.36■□□□□ 0.69
CHMP24386 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CHMP24386 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP24386 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP24386 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP24386 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP24386 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CHMP24386 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP24386 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP24386 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP24386 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CHMP24386 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP24386 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.35■□□□□ 0.69
CHMP24386 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.35■□□□□ 0.69
CHMP24386 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP24386 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP24386 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP24386 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP24386 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CHMP24386 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP24386 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP24386 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP24386 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP24386 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.34■□□□□ 0.69
CHMP24386 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP24386 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP24386 AC055733.4-201ENST00000638462 1354 ntBASIC19.34■□□□□ 0.69
CHMP24386 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP24386 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP24386 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP24386 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP24386 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.34■□□□□ 0.69
CHMP24386 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP24386 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP24386 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP24386 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
CHMP24386 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.34■□□□□ 0.69
CHMP24386 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP24386 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP24386 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP24386 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP24386 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP24386 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHMP24386 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHMP24386 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHMP24386 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHMP24386 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CHMP24386 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHMP24386 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
CHMP24386 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.33■□□□□ 0.69
CHMP24386 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHMP24386 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP24386 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP24386 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.33■□□□□ 0.68
CHMP24386 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms