Protein–RNA interactions for Protein: P20448

HCA4, ATP-dependent RNA helicase HCA4, yeastyeast

Known RBP Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HCA4P20448 LST4YKL176C 2487 nt3.81□□□□□ -1.8
HCA4P20448 GRX2YDR513W 432 nt3.81□□□□□ -1.8
HCA4P20448 YGR228WYGR228W 345 nt3.81□□□□□ -1.8
HCA4P20448 PAU13YHL046C 363 nt3.81□□□□□ -1.8
HCA4P20448 ANB1YJR047C 474 nt3.81□□□□□ -1.8
HCA4P20448 RPL40BYKR094C 387 nt3.81□□□□□ -1.8
HCA4P20448 SDO1YLR022C 753 nt3.81□□□□□ -1.8
HCA4P20448 YMR153C-AYMR153C-A 336 nt3.81□□□□□ -1.8
HCA4P20448 MBA1YBR185C 837 nt3.81□□□□□ -1.8
HCA4P20448 FUN12YAL035W 3009 nt3.81□□□□□ -1.8
HCA4P20448 SLD5YDR489W 885 nt3.8□□□□□ -1.8
HCA4P20448 YER175W-AYER175W-A 165 nt3.8□□□□□ -1.8
HCA4P20448 YGL039WYGL039W 1047 nt3.8□□□□□ -1.8
HCA4P20448 YHL026CYHL026C 948 nt3.8□□□□□ -1.8
HCA4P20448 RPL17BYJL177W 555 nt3.8□□□□□ -1.8
HCA4P20448 DYN3YMR299C 939 nt3.8□□□□□ -1.8
HCA4P20448 MUD2YKL074C 1584 nt3.8□□□□□ -1.8
HCA4P20448 BEM4YPL161C 1902 nt3.8□□□□□ -1.8
HCA4P20448 YCR064CYCR064C 411 nt3.79□□□□□ -1.8
HCA4P20448 CDC50YCR094W 1176 nt3.79□□□□□ -1.8
HCA4P20448 SWF1YDR126W 1011 nt3.79□□□□□ -1.8
HCA4P20448 RPL27BYDR471W 411 nt3.79□□□□□ -1.8
HCA4P20448 FAR7YFR008W 666 nt3.79□□□□□ -1.8
HCA4P20448 YHR212CYHR212C 336 nt3.79□□□□□ -1.8
HCA4P20448 tV(CAC)DtV(CAC)D 73 nt3.79□□□□□ -1.8
HCA4P20448 tV(CAC)HtV(CAC)H 73 nt3.79□□□□□ -1.8
HCA4P20448 YKE2YLR200W 345 nt3.79□□□□□ -1.8
HCA4P20448 YAR060CYAR060C 336 nt3.79□□□□□ -1.8
HCA4P20448 TIF11YMR260C 462 nt3.79□□□□□ -1.8
HCA4P20448 YPL225WYPL225W 441 nt3.79□□□□□ -1.8
HCA4P20448 LTP1YPR073C 486 nt3.79□□□□□ -1.8
HCA4P20448 PKH1YDR490C 2301 nt3.79□□□□□ -1.8
HCA4P20448 SKO1YNL167C 1944 nt3.79□□□□□ -1.8
HCA4P20448 ARG5,6YER069W 2592 nt3.79□□□□□ -1.8
HCA4P20448 NSP1YJL041W 2472 nt3.79□□□□□ -1.8
HCA4P20448 SLK19YOR195W 2466 nt3.79□□□□□ -1.8
HCA4P20448 ATG21YPL100W 1491 nt3.79□□□□□ -1.8
HCA4P20448 ASI3YNL008C 2031 nt3.78□□□□□ -1.8
HCA4P20448 SRD1YCR018C 666 nt3.78□□□□□ -1.8
HCA4P20448 YCR045W-AYCR045W-A 351 nt3.78□□□□□ -1.8
HCA4P20448 PSF1YDR013W 627 nt3.78□□□□□ -1.8
HCA4P20448 YDR193WYDR193W 399 nt3.78□□□□□ -1.8
HCA4P20448 NTF2YER009W 378 nt3.78□□□□□ -1.8
HCA4P20448 SPT4YGR063C 309 nt3.78□□□□□ -1.8
HCA4P20448 YLL044WYLL044W 447 nt3.78□□□□□ -1.8
HCA4P20448 VPS63YLR261C 327 nt3.78□□□□□ -1.8
HCA4P20448 RAD33YML011C 534 nt3.78□□□□□ -1.8
HCA4P20448 GRE2YOL151W 1029 nt3.78□□□□□ -1.8
HCA4P20448 PHO81YGR233C 3537 nt3.78□□□□□ -1.8
HCA4P20448 SRP68YPL243W 1800 nt3.78□□□□□ -1.8
HCA4P20448 POL4YCR014C 1749 nt3.78□□□□□ -1.8
HCA4P20448 FRQ1YDR373W 573 nt3.77□□□□□ -1.81
HCA4P20448 YER135CYER135C 393 nt3.77□□□□□ -1.81
HCA4P20448 VMA10YHR039C-A 345 nt3.77□□□□□ -1.81
HCA4P20448 BCD1YHR040W 1101 nt3.77□□□□□ -1.81
HCA4P20448 AIM29YKR074W 468 nt3.77□□□□□ -1.81
HCA4P20448 GOT1YMR292W 417 nt3.77□□□□□ -1.81
HCA4P20448 YNL184CYNL184C 327 nt3.77□□□□□ -1.81
HCA4P20448 YOR231C-AYOR231C-A 201 nt3.77□□□□□ -1.81
HCA4P20448 TPK2YPL203W 1143 nt3.77□□□□□ -1.81
HCA4P20448 YPR050CYPR050C 414 nt3.77□□□□□ -1.81
HCA4P20448 snR35snR35 204 nt3.77□□□□□ -1.81
HCA4P20448 SHG1YBR258C 429 nt3.77□□□□□ -1.81
HCA4P20448 LCB5YLR260W 2064 nt3.77□□□□□ -1.81
HCA4P20448 YCR022CYCR022C 345 nt3.76□□□□□ -1.81
HCA4P20448 CHZ1YER030W 462 nt3.76□□□□□ -1.81
HCA4P20448 FYV4YHR059W 393 nt3.76□□□□□ -1.81
HCA4P20448 YIL141WYIL141W 390 nt3.76□□□□□ -1.81
HCA4P20448 YBR285WYBR285W 435 nt3.76□□□□□ -1.81
HCA4P20448 YLR352WYLR352W 2424 nt3.76□□□□□ -1.81
HCA4P20448 PRP22YER013W 3438 nt3.76□□□□□ -1.81
HCA4P20448 BRE5YNR051C 1548 nt3.75□□□□□ -1.81
HCA4P20448 HRD1YOL013C 1656 nt3.75□□□□□ -1.81
HCA4P20448 DAS1YJL149W 1992 nt3.75□□□□□ -1.81
HCA4P20448 OPI6YDL096C 327 nt3.75□□□□□ -1.81
HCA4P20448 YDR464C-AYDR464C-A 189 nt3.75□□□□□ -1.81
HCA4P20448 RPL1BYGL135W 654 nt3.75□□□□□ -1.81
HCA4P20448 ECL1YGR146C 636 nt3.75□□□□□ -1.81
HCA4P20448 SOD1YJR104C 465 nt3.75□□□□□ -1.81
HCA4P20448 YLR416CYLR416C 399 nt3.75□□□□□ -1.81
HCA4P20448 YMR122W-AYMR122W-A 255 nt3.75□□□□□ -1.81
HCA4P20448 YAF9YNL107W 681 nt3.75□□□□□ -1.81
HCA4P20448 RPL1AYPL220W 654 nt3.75□□□□□ -1.81
HCA4P20448 RPC40YPR110C 1008 nt3.75□□□□□ -1.81
HCA4P20448 SEC6YIL068C 2418 nt3.74□□□□□ -1.81
HCA4P20448 ADY4YLR227C 1482 nt3.74□□□□□ -1.81
HCA4P20448 15S_rRNA15S_rRNA 1649 nt3.74□□□□□ -1.81
HCA4P20448 CHS3YBR023C 3498 nt3.74□□□□□ -1.81
HCA4P20448 Q0032Q0032 291 nt3.74□□□□□ -1.81
HCA4P20448 FAP7YDL166C 594 nt3.74□□□□□ -1.81
HCA4P20448 YDR149CYDR149C 708 nt3.74□□□□□ -1.81
HCA4P20448 FMN1YDR236C 657 nt3.74□□□□□ -1.81
HCA4P20448 CPR5YDR304C 678 nt3.74□□□□□ -1.81
HCA4P20448 SMT3YDR510W 306 nt3.74□□□□□ -1.81
HCA4P20448 YHR214C-CYHR214C-C 1437 nt3.74□□□□□ -1.81
HCA4P20448 YIR020CYIR020C 303 nt3.74□□□□□ -1.81
HCA4P20448 VTC4YJL012C 2166 nt3.74□□□□□ -1.81
HCA4P20448 YJL127C-BYJL127C-B 159 nt3.74□□□□□ -1.81
HCA4P20448 YKT6YKL196C 603 nt3.74□□□□□ -1.81
HCA4P20448 CTK3YML112W 891 nt3.74□□□□□ -1.81
Retrieved 100 of 7,029 protein–RNA pairs in 22.2 ms