Protein–RNA interactions for Protein: P0CX57

TY1A-A, Transposon Ty1-A Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-AP0CX57 YHR213W-BYHR213W-B 300 nt5□□□□□ -1.61
TY1A-AP0CX57 RPS21BYJL136C 264 nt5□□□□□ -1.61
TY1A-AP0CX57 RPS4AYJR145C 786 nt5□□□□□ -1.61
TY1A-AP0CX57 YAR064WYAR064W 300 nt5□□□□□ -1.61
TY1A-AP0CX57 ARO2YGL148W 1131 nt4.99□□□□□ -1.61
TY1A-AP0CX57 VPS55YJR044C 423 nt4.99□□□□□ -1.61
TY1A-AP0CX57 FIT2YOR382W 462 nt4.99□□□□□ -1.61
TY1A-AP0CX57 ATP22YDR350C 2055 nt4.99□□□□□ -1.61
TY1A-AP0CX57 LAS21YJL062W 2493 nt4.98□□□□□ -1.61
TY1A-AP0CX57 RPL35AYDL191W 363 nt4.98□□□□□ -1.61
TY1A-AP0CX57 FRQ1YDR373W 573 nt4.98□□□□□ -1.61
TY1A-AP0CX57 YAE1YJR067C 426 nt4.98□□□□□ -1.61
TY1A-AP0CX57 VPS1YKR001C 2115 nt4.98□□□□□ -1.61
TY1A-AP0CX57 YBL053WYBL053W 375 nt4.98□□□□□ -1.61
TY1A-AP0CX57 AMD1YML035C 2433 nt4.98□□□□□ -1.61
TY1A-AP0CX57 MCM2YBL023C 2607 nt4.98□□□□□ -1.61
TY1A-AP0CX57 UBX7YBR273C 1311 nt4.97□□□□□ -1.61
TY1A-AP0CX57 COG8YML071C 1824 nt4.97□□□□□ -1.61
TY1A-AP0CX57 SNX41YDR425W 1878 nt4.97□□□□□ -1.61
TY1A-AP0CX57 VTC1YER072W 390 nt4.97□□□□□ -1.61
TY1A-AP0CX57 YER187WYER187W 426 nt4.97□□□□□ -1.61
TY1A-AP0CX57 tL(UAA)B1tL(UAA)B1 84 nt4.97□□□□□ -1.61
TY1A-AP0CX57 tL(UAA)B2tL(UAA)B2 84 nt4.97□□□□□ -1.61
TY1A-AP0CX57 tL(UAA)DtL(UAA)D 84 nt4.97□□□□□ -1.61
TY1A-AP0CX57 SUP51tL(UAA)J 84 nt4.97□□□□□ -1.61
TY1A-AP0CX57 tL(UAA)KtL(UAA)K 84 nt4.97□□□□□ -1.61
TY1A-AP0CX57 tL(UAA)LtL(UAA)L 84 nt4.97□□□□□ -1.61
TY1A-AP0CX57 tL(UAA)NtL(UAA)N 84 nt4.97□□□□□ -1.61
TY1A-AP0CX57 YHR212CYHR212C 336 nt4.97□□□□□ -1.61
TY1A-AP0CX57 YAL047W-AYAL047W-A 330 nt4.97□□□□□ -1.61
TY1A-AP0CX57 YAR060CYAR060C 336 nt4.97□□□□□ -1.61
TY1A-AP0CX57 HPF1YOL155C 2904 nt4.97□□□□□ -1.61
TY1A-AP0CX57 YJR030CYJR030C 2238 nt4.97□□□□□ -1.61
TY1A-AP0CX57 PTR3YFR029W 2037 nt4.97□□□□□ -1.61
TY1A-AP0CX57 COX1Q0045 1605 nt4.97□□□□□ -1.61
TY1A-AP0CX57 SKM1YOL113W 1968 nt4.96□□□□□ -1.61
TY1A-AP0CX57 ELP2YGR200C 2367 nt4.96□□□□□ -1.62
TY1A-AP0CX57 YHL042WYHL042W 453 nt4.96□□□□□ -1.62
TY1A-AP0CX57 URM1YIL008W 300 nt4.96□□□□□ -1.62
TY1A-AP0CX57 SSP120YLR250W 705 nt4.96□□□□□ -1.62
TY1A-AP0CX57 BIT2YBR270C 1638 nt4.96□□□□□ -1.62
TY1A-AP0CX57 DBP6YNR038W 1890 nt4.95□□□□□ -1.62
TY1A-AP0CX57 YDR340WYDR340W 303 nt4.95□□□□□ -1.62
TY1A-AP0CX57 BAT1YHR208W 1182 nt4.95□□□□□ -1.62
TY1A-AP0CX57 RAD27YKL113C 1149 nt4.95□□□□□ -1.62
TY1A-AP0CX57 SAP30YMR263W 606 nt4.95□□□□□ -1.62
TY1A-AP0CX57 YMR326CYMR326C 309 nt4.95□□□□□ -1.62
TY1A-AP0CX57 YNL179CYNL179C 438 nt4.95□□□□□ -1.62
TY1A-AP0CX57 SAP155YFR040W 3009 nt4.95□□□□□ -1.62
TY1A-AP0CX57 ORC2YBR060C 1863 nt4.94□□□□□ -1.62
TY1A-AP0CX57 ATM1YMR301C 2073 nt4.94□□□□□ -1.62
TY1A-AP0CX57 APC5YOR249C 2058 nt4.94□□□□□ -1.62
TY1A-AP0CX57 IGO2YHR132W-A 396 nt4.94□□□□□ -1.62
TY1A-AP0CX57 YIL102CYIL102C 306 nt4.94□□□□□ -1.62
TY1A-AP0CX57 STM1YLR150W 822 nt4.94□□□□□ -1.62
TY1A-AP0CX57 YNL010WYNL010W 726 nt4.94□□□□□ -1.62
TY1A-AP0CX57 PRM1YNL279W 1986 nt4.94□□□□□ -1.62
TY1A-AP0CX57 EXO70YJL085W 1872 nt4.94□□□□□ -1.62
TY1A-AP0CX57 DUR1,2YBR208C 5508 nt4.94□□□□□ -1.62
TY1A-AP0CX57 TAF7YMR227C 1773 nt4.93□□□□□ -1.62
TY1A-AP0CX57 AAP1YHR047C 2571 nt4.93□□□□□ -1.62
TY1A-AP0CX57 PIF1YML061C 2580 nt4.93□□□□□ -1.62
TY1A-AP0CX57 PAU2YEL049W 363 nt4.93□□□□□ -1.62
TY1A-AP0CX57 MRP8YKL142W 660 nt4.93□□□□□ -1.62
TY1A-AP0CX57 YLR358CYLR358C 564 nt4.93□□□□□ -1.62
TY1A-AP0CX57 YOR050CYOR050C 348 nt4.93□□□□□ -1.62
TY1A-AP0CX57 MF(ALPHA)1YPL187W 498 nt4.93□□□□□ -1.62
TY1A-AP0CX57 SGO1YOR073W 1773 nt4.93□□□□□ -1.62
TY1A-AP0CX57 RIM20YOR275C 1986 nt4.93□□□□□ -1.62
TY1A-AP0CX57 HTA1YDR225W 399 nt4.92□□□□□ -1.62
TY1A-AP0CX57 YDR442WYDR442W 393 nt4.92□□□□□ -1.62
TY1A-AP0CX57 FMP10YER182W 735 nt4.92□□□□□ -1.62
TY1A-AP0CX57 OLI1Q0130 231 nt4.92□□□□□ -1.62
TY1A-AP0CX57 YKL111CYKL111C 336 nt4.92□□□□□ -1.62
TY1A-AP0CX57 AAD15YOL165C 432 nt4.92□□□□□ -1.62
TY1A-AP0CX57 YOR329W-AYOR329W-A 210 nt4.92□□□□□ -1.62
TY1A-AP0CX57 NUT2YPR168W 474 nt4.92□□□□□ -1.62
TY1A-AP0CX57 FRE4YNR060W 2160 nt4.92□□□□□ -1.62
TY1A-AP0CX57 OCA5YHL029C 2040 nt4.92□□□□□ -1.62
TY1A-AP0CX57 LCB4YOR171C 1875 nt4.92□□□□□ -1.62
TY1A-AP0CX57 YNR073CYNR073C 1509 nt4.92□□□□□ -1.62
TY1A-AP0CX57 PDI1YCL043C 1569 nt4.91□□□□□ -1.62
TY1A-AP0CX57 PEX6YNL329C 3093 nt4.91□□□□□ -1.62
TY1A-AP0CX57 MPS3YJL019W 2049 nt4.91□□□□□ -1.62
TY1A-AP0CX57 MZM1YDR493W 372 nt4.91□□□□□ -1.62
TY1A-AP0CX57 RPL37AYLR185W 267 nt4.91□□□□□ -1.62
TY1A-AP0CX57 YMR252CYMR252C 405 nt4.91□□□□□ -1.62
TY1A-AP0CX57 TIF4631YGR162W 2859 nt4.9□□□□□ -1.62
TY1A-AP0CX57 IKS1YJL057C 2004 nt4.9□□□□□ -1.62
TY1A-AP0CX57 YDR061WYDR061W 1620 nt4.9□□□□□ -1.62
TY1A-AP0CX57 AVT3YKL146W 2079 nt4.9□□□□□ -1.62
TY1A-AP0CX57 ARN2YHL047C 1863 nt4.9□□□□□ -1.62
TY1A-AP0CX57 YHR182WYHR182W 2358 nt4.9□□□□□ -1.62
TY1A-AP0CX57 YDR250CYDR250C 276 nt4.9□□□□□ -1.63
TY1A-AP0CX57 MTC3YGL226W 372 nt4.9□□□□□ -1.63
TY1A-AP0CX57 YOL046CYOL046C 675 nt4.9□□□□□ -1.63
TY1A-AP0CX57 GRS1YBR121C 2004 nt4.9□□□□□ -1.63
TY1A-AP0CX57 STB2YMR053C 2553 nt4.9□□□□□ -1.63
TY1A-AP0CX57 MSC2YDR205W 2175 nt4.89□□□□□ -1.63
TY1A-AP0CX57 YBR238CYBR238C 2196 nt4.89□□□□□ -1.63
Retrieved 100 of 7,029 protein–RNA pairs in 63.3 ms