Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CD48P09326 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.57■■□□□ 1.04
CD48P09326 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CD48P09326 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.57■■□□□ 1.04
CD48P09326 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.56■■□□□ 1.04
CD48P09326 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CD48P09326 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
CD48P09326 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CD48P09326 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.56■■□□□ 1.04
CD48P09326 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CD48P09326 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CD48P09326 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.56■■□□□ 1.04
CD48P09326 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.56■■□□□ 1.04
CD48P09326 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.56■■□□□ 1.04
CD48P09326 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CD48P09326 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CD48P09326 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CD48P09326 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CD48P09326 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CD48P09326 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CD48P09326 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CD48P09326 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CD48P09326 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CD48P09326 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.55■■□□□ 1.04
CD48P09326 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.55■■□□□ 1.04
CD48P09326 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.55■■□□□ 1.04
CD48P09326 RARRES2P11-201ENST00000635158 484 ntBASIC21.55■■□□□ 1.04
CD48P09326 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.55■■□□□ 1.04
CD48P09326 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CD48P09326 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CD48P09326 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CD48P09326 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CD48P09326 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CD48P09326 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CD48P09326 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CD48P09326 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CD48P09326 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CD48P09326 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CD48P09326 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CD48P09326 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CD48P09326 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CD48P09326 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CD48P09326 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.54■■□□□ 1.04
CD48P09326 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
CD48P09326 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CD48P09326 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CD48P09326 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.54■■□□□ 1.04
CD48P09326 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CD48P09326 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CD48P09326 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CD48P09326 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CD48P09326 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CD48P09326 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CD48P09326 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.53■■□□□ 1.04
CD48P09326 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CD48P09326 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CD48P09326 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CD48P09326 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
CD48P09326 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CD48P09326 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CD48P09326 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CD48P09326 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CD48P09326 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CD48P09326 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CD48P09326 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CD48P09326 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CD48P09326 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CD48P09326 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CD48P09326 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CD48P09326 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CD48P09326 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CD48P09326 AC097381.1-201ENST00000429019 1296 ntBASIC21.52■■□□□ 1.04
CD48P09326 AC087623.3-201ENST00000607047 1098 ntBASIC21.52■■□□□ 1.04
CD48P09326 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CD48P09326 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CD48P09326 KRT16P2-201ENST00000414673 1423 ntBASIC21.52■■□□□ 1.04
CD48P09326 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CD48P09326 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CD48P09326 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.52■■□□□ 1.03
CD48P09326 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CD48P09326 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CD48P09326 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CD48P09326 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.51■■□□□ 1.03
CD48P09326 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CD48P09326 FEM1AP1-201ENST00000431297 1995 ntBASIC21.51■■□□□ 1.03
CD48P09326 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CD48P09326 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CD48P09326 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.51■■□□□ 1.03
CD48P09326 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.51■■□□□ 1.03
CD48P09326 LINC01006-201ENST00000333319 2292 ntBASIC21.51■■□□□ 1.03
CD48P09326 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CD48P09326 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CD48P09326 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.51■■□□□ 1.03
CD48P09326 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CD48P09326 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CD48P09326 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CD48P09326 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
CD48P09326 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CD48P09326 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CD48P09326 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms