Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.39■□□□□ 0.85
HOXC4P09017 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.39■□□□□ 0.85
HOXC4P09017 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HOXC4P09017 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.39■□□□□ 0.85
HOXC4P09017 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
HOXC4P09017 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HOXC4P09017 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.38■□□□□ 0.85
HOXC4P09017 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
HOXC4P09017 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HOXC4P09017 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
HOXC4P09017 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.38■□□□□ 0.85
HOXC4P09017 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HOXC4P09017 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
HOXC4P09017 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.38■□□□□ 0.85
HOXC4P09017 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.38■□□□□ 0.85
HOXC4P09017 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HOXC4P09017 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HOXC4P09017 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
HOXC4P09017 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HOXC4P09017 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
HOXC4P09017 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
HOXC4P09017 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HOXC4P09017 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HOXC4P09017 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.37■□□□□ 0.85
HOXC4P09017 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HOXC4P09017 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HOXC4P09017 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HOXC4P09017 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HOXC4P09017 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
HOXC4P09017 DUSP5P2-201ENST00000426873 1033 ntBASIC20.37■□□□□ 0.85
HOXC4P09017 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
HOXC4P09017 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.37■□□□□ 0.85
HOXC4P09017 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HOXC4P09017 AL589743.5-201ENST00000616611 1050 ntBASIC20.37■□□□□ 0.85
HOXC4P09017 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HOXC4P09017 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
HOXC4P09017 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.37■□□□□ 0.85
HOXC4P09017 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HOXC4P09017 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
HOXC4P09017 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HOXC4P09017 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HOXC4P09017 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HOXC4P09017 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.36■□□□□ 0.85
HOXC4P09017 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
HOXC4P09017 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.36■□□□□ 0.85
HOXC4P09017 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.36■□□□□ 0.85
HOXC4P09017 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.36■□□□□ 0.85
HOXC4P09017 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.36■□□□□ 0.85
HOXC4P09017 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HOXC4P09017 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HOXC4P09017 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.36■□□□□ 0.85
HOXC4P09017 KRT18P68-201ENST00000392293 1000 ntBASIC20.36■□□□□ 0.85
HOXC4P09017 AL355472.2-201ENST00000422958 438 ntBASIC20.36■□□□□ 0.85
HOXC4P09017 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.36■□□□□ 0.85
HOXC4P09017 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
HOXC4P09017 AC083880.1-201ENST00000608266 535 ntBASIC20.36■□□□□ 0.85
HOXC4P09017 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HOXC4P09017 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HOXC4P09017 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.36■□□□□ 0.85
HOXC4P09017 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HOXC4P09017 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.36■□□□□ 0.85
HOXC4P09017 AC133561.1-201ENST00000568600 2415 ntBASIC20.35■□□□□ 0.85
HOXC4P09017 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.35■□□□□ 0.85
HOXC4P09017 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HOXC4P09017 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.35■□□□□ 0.85
HOXC4P09017 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HOXC4P09017 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HOXC4P09017 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HOXC4P09017 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
HOXC4P09017 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HOXC4P09017 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.35■□□□□ 0.85
HOXC4P09017 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.35■□□□□ 0.85
HOXC4P09017 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.35■□□□□ 0.85
HOXC4P09017 KRT17P1-201ENST00000399211 1546 ntBASIC20.35■□□□□ 0.85
HOXC4P09017 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.35■□□□□ 0.85
HOXC4P09017 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
HOXC4P09017 CYP21A1P-202ENST00000354927 1481 ntBASIC20.35■□□□□ 0.85
HOXC4P09017 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.35■□□□□ 0.85
HOXC4P09017 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
HOXC4P09017 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.35■□□□□ 0.85
HOXC4P09017 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.34■□□□□ 0.85
HOXC4P09017 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HOXC4P09017 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
HOXC4P09017 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HOXC4P09017 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.34■□□□□ 0.85
HOXC4P09017 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HOXC4P09017 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
HOXC4P09017 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HOXC4P09017 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.34■□□□□ 0.85
HOXC4P09017 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.34■□□□□ 0.85
HOXC4P09017 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.34■□□□□ 0.85
HOXC4P09017 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.34■□□□□ 0.85
HOXC4P09017 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
HOXC4P09017 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.34■□□□□ 0.85
HOXC4P09017 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.34■□□□□ 0.85
HOXC4P09017 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HOXC4P09017 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HOXC4P09017 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HOXC4P09017 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
HOXC4P09017 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms