Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.95
RETP07949 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.01■□□□□ 0.95
RETP07949 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RETP07949 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RETP07949 LSM12P1-201ENST00000411836 588 ntBASIC21.01■□□□□ 0.95
RETP07949 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RETP07949 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.01■□□□□ 0.95
RETP07949 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.01■□□□□ 0.95
RETP07949 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.01■□□□□ 0.95
RETP07949 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RETP07949 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RETP07949 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RETP07949 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RETP07949 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RETP07949 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RETP07949 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RETP07949 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RETP07949 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RETP07949 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21■□□□□ 0.95
RETP07949 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RETP07949 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
RETP07949 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21■□□□□ 0.95
RETP07949 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21■□□□□ 0.95
RETP07949 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21■□□□□ 0.95
RETP07949 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21■□□□□ 0.95
RETP07949 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RETP07949 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
RETP07949 RPPH1-201ENST00000516869 333 ntBASIC21■□□□□ 0.95
RETP07949 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21■□□□□ 0.95
RETP07949 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
RETP07949 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21■□□□□ 0.95
RETP07949 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
RETP07949 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21■□□□□ 0.95
RETP07949 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RETP07949 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RETP07949 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
RETP07949 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.99■□□□□ 0.95
RETP07949 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.99■□□□□ 0.95
RETP07949 AL034346.1-201ENST00000568244 1277 ntBASIC20.99■□□□□ 0.95
RETP07949 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.99■□□□□ 0.95
RETP07949 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RETP07949 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RETP07949 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RETP07949 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RETP07949 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RETP07949 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.99■□□□□ 0.95
RETP07949 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RETP07949 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
RETP07949 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.98■□□□□ 0.95
RETP07949 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RETP07949 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
RETP07949 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RETP07949 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RETP07949 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.98■□□□□ 0.95
RETP07949 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RETP07949 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RETP07949 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RETP07949 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RETP07949 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RETP07949 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.98■□□□□ 0.95
RETP07949 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.98■□□□□ 0.95
RETP07949 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RETP07949 AC008403.3-201ENST00000598924 454 ntBASIC20.98■□□□□ 0.95
RETP07949 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.98■□□□□ 0.95
RETP07949 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RETP07949 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RETP07949 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RETP07949 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RETP07949 POU5F1P4-201ENST00000413175 1085 ntBASIC20.97■□□□□ 0.95
RETP07949 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RETP07949 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RETP07949 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.97■□□□□ 0.95
RETP07949 C1QBPP2-201ENST00000528754 825 ntBASIC20.97■□□□□ 0.95
RETP07949 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.97■□□□□ 0.95
RETP07949 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.97■□□□□ 0.95
RETP07949 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.97■□□□□ 0.95
RETP07949 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RETP07949 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RETP07949 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
RETP07949 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
RETP07949 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RETP07949 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RETP07949 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RETP07949 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RETP07949 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
RETP07949 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.96■□□□□ 0.95
RETP07949 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RETP07949 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.96■□□□□ 0.95
RETP07949 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.96■□□□□ 0.95
RETP07949 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.96■□□□□ 0.95
RETP07949 SNORA78-201ENST00000459373 127 ntBASIC20.96■□□□□ 0.95
RETP07949 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.96■□□□□ 0.95
RETP07949 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
RETP07949 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
RETP07949 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.96■□□□□ 0.95
RETP07949 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.96■□□□□ 0.95
RETP07949 CYP2T3P-201ENST00000601990 817 ntBASIC20.96■□□□□ 0.95
RETP07949 Z99916.2-201ENST00000604037 246 ntBASIC20.96■□□□□ 0.95
RETP07949 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.96■□□□□ 0.95
RETP07949 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms