Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 KRT18P14-201ENST00000534205 1250 ntBASIC20.8■□□□□ 0.92
APOA4P06727 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
APOA4P06727 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
APOA4P06727 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
APOA4P06727 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
APOA4P06727 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
APOA4P06727 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
APOA4P06727 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.8■□□□□ 0.92
APOA4P06727 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
APOA4P06727 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.79■□□□□ 0.92
APOA4P06727 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.79■□□□□ 0.92
APOA4P06727 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
APOA4P06727 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.79■□□□□ 0.92
APOA4P06727 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
APOA4P06727 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.79■□□□□ 0.92
APOA4P06727 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.79■□□□□ 0.92
APOA4P06727 AC097381.1-201ENST00000429019 1296 ntBASIC20.79■□□□□ 0.92
APOA4P06727 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.79■□□□□ 0.92
APOA4P06727 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
APOA4P06727 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.79■□□□□ 0.92
APOA4P06727 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.79■□□□□ 0.92
APOA4P06727 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
APOA4P06727 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.79■□□□□ 0.92
APOA4P06727 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
APOA4P06727 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.79■□□□□ 0.92
APOA4P06727 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
APOA4P06727 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
APOA4P06727 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
APOA4P06727 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.78■□□□□ 0.92
APOA4P06727 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
APOA4P06727 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
APOA4P06727 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
APOA4P06727 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
APOA4P06727 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.78■□□□□ 0.92
APOA4P06727 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
APOA4P06727 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
APOA4P06727 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
APOA4P06727 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
APOA4P06727 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.78■□□□□ 0.92
APOA4P06727 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.77■□□□□ 0.92
APOA4P06727 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
APOA4P06727 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
APOA4P06727 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
APOA4P06727 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
APOA4P06727 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.77■□□□□ 0.92
APOA4P06727 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
APOA4P06727 AC053503.5-201ENST00000601508 636 ntBASIC20.77■□□□□ 0.92
APOA4P06727 MIR6821-201ENST00000617625 74 ntBASIC20.77■□□□□ 0.92
APOA4P06727 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
APOA4P06727 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
APOA4P06727 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
APOA4P06727 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
APOA4P06727 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
APOA4P06727 AC006128.1-201ENST00000624704 1661 ntBASIC20.77■□□□□ 0.91
APOA4P06727 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
APOA4P06727 LINC01006-201ENST00000333319 2292 ntBASIC20.76■□□□□ 0.91
APOA4P06727 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.76■□□□□ 0.91
APOA4P06727 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
APOA4P06727 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
APOA4P06727 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
APOA4P06727 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
APOA4P06727 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
APOA4P06727 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
APOA4P06727 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.76■□□□□ 0.91
APOA4P06727 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
APOA4P06727 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.76■□□□□ 0.91
APOA4P06727 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
APOA4P06727 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
APOA4P06727 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.76■□□□□ 0.91
APOA4P06727 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.76■□□□□ 0.91
APOA4P06727 EEF1DP3-203ENST00000566025 782 ntBASIC20.76■□□□□ 0.91
APOA4P06727 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.76■□□□□ 0.91
APOA4P06727 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
APOA4P06727 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
APOA4P06727 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
APOA4P06727 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
APOA4P06727 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
APOA4P06727 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
APOA4P06727 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.75■□□□□ 0.91
APOA4P06727 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.75■□□□□ 0.91
APOA4P06727 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.75■□□□□ 0.91
APOA4P06727 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
APOA4P06727 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APOA4P06727 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
APOA4P06727 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
APOA4P06727 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
APOA4P06727 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.75■□□□□ 0.91
APOA4P06727 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.75■□□□□ 0.91
APOA4P06727 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
APOA4P06727 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
APOA4P06727 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
APOA4P06727 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APOA4P06727 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
APOA4P06727 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APOA4P06727 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APOA4P06727 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.74■□□□□ 0.91
APOA4P06727 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
APOA4P06727 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
APOA4P06727 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
APOA4P06727 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms