Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC233702.5-201ENST00000584107 538 ntBASIC22.15■■□□□ 1.14
RB1P06400 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RB1P06400 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RB1P06400 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC22.15■■□□□ 1.14
RB1P06400 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
RB1P06400 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.15■■□□□ 1.14
RB1P06400 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.14■■□□□ 1.13
RB1P06400 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RB1P06400 PTPA-214ENST00000423100 988 ntTSL 2 BASIC22.14■■□□□ 1.13
RB1P06400 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
RB1P06400 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RB1P06400 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.14■■□□□ 1.13
RB1P06400 CYP21A1P-202ENST00000354927 1481 ntBASIC22.14■■□□□ 1.13
RB1P06400 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC22.14■■□□□ 1.13
RB1P06400 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.14■■□□□ 1.13
RB1P06400 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RB1P06400 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC22.13■■□□□ 1.13
RB1P06400 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RB1P06400 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RB1P06400 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.13■■□□□ 1.13
RB1P06400 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RB1P06400 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
RB1P06400 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22.12■■□□□ 1.13
RB1P06400 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RB1P06400 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.12■■□□□ 1.13
RB1P06400 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RB1P06400 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RB1P06400 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RB1P06400 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RB1P06400 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RB1P06400 RPS2P55-201ENST00000397318 883 ntBASIC22.12■■□□□ 1.13
RB1P06400 AC107956.1-201ENST00000494359 873 ntBASIC22.12■■□□□ 1.13
RB1P06400 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
RB1P06400 BX088651.1-201ENST00000540551 451 ntBASIC22.12■■□□□ 1.13
RB1P06400 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
RB1P06400 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC22.12■■□□□ 1.13
RB1P06400 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RB1P06400 AC105020.6-201ENST00000621523 1217 ntBASIC22.12■■□□□ 1.13
RB1P06400 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC22.12■■□□□ 1.13
RB1P06400 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
RB1P06400 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.12■■□□□ 1.13
RB1P06400 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RB1P06400 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RB1P06400 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
RB1P06400 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RB1P06400 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
RB1P06400 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RB1P06400 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RB1P06400 C11orf96-202ENST00000528572 1834 ntBASIC22.11■■□□□ 1.13
RB1P06400 AP001412.1-201ENST00000608405 714 ntBASIC22.11■■□□□ 1.13
RB1P06400 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC22.11■■□□□ 1.13
RB1P06400 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.11■■□□□ 1.13
RB1P06400 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RB1P06400 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
RB1P06400 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.11■■□□□ 1.13
RB1P06400 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RB1P06400 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
RB1P06400 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RB1P06400 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
RB1P06400 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RB1P06400 AC133681.1-201ENST00000465482 601 ntBASIC22.1■■□□□ 1.13
RB1P06400 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC22.1■■□□□ 1.13
RB1P06400 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
RB1P06400 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC22.1■■□□□ 1.13
RB1P06400 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
RB1P06400 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RB1P06400 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RB1P06400 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
RB1P06400 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RB1P06400 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC22.1■■□□□ 1.13
RB1P06400 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RB1P06400 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22.1■■□□□ 1.13
RB1P06400 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RB1P06400 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC22.09■■□□□ 1.13
RB1P06400 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RB1P06400 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
RB1P06400 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC22.09■■□□□ 1.13
RB1P06400 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC22.09■■□□□ 1.13
RB1P06400 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC22.09■■□□□ 1.13
RB1P06400 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RB1P06400 KLF2-202ENST00000592003 564 ntTSL 3 BASIC22.09■■□□□ 1.13
RB1P06400 MTDHP1-201ENST00000605323 784 ntBASIC22.09■■□□□ 1.13
RB1P06400 AC010331.1-201ENST00000611423 582 ntBASIC22.09■■□□□ 1.13
RB1P06400 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC22.09■■□□□ 1.13
RB1P06400 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RB1P06400 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RB1P06400 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
RB1P06400 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
RB1P06400 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RB1P06400 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.09■■□□□ 1.13
RB1P06400 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RB1P06400 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RB1P06400 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.08■■□□□ 1.13
RB1P06400 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC22.08■■□□□ 1.13
RB1P06400 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RB1P06400 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC22.08■■□□□ 1.13
RB1P06400 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
RB1P06400 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
RB1P06400 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RB1P06400 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms