Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC27.71■■■□□ 2.03
COL5A2P05997 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC27.7■■■□□ 2.03
COL5A2P05997 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC27.7■■■□□ 2.03
COL5A2P05997 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
COL5A2P05997 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC27.7■■■□□ 2.03
COL5A2P05997 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
COL5A2P05997 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC27.7■■■□□ 2.03
COL5A2P05997 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
COL5A2P05997 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
COL5A2P05997 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
COL5A2P05997 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC27.7■■■□□ 2.02
COL5A2P05997 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
COL5A2P05997 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC27.7■■■□□ 2.02
COL5A2P05997 KRT18P21-201ENST00000515767 1272 ntBASIC27.7■■■□□ 2.02
COL5A2P05997 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC27.7■■■□□ 2.02
COL5A2P05997 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC27.7■■■□□ 2.02
COL5A2P05997 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
COL5A2P05997 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC27.7■■■□□ 2.02
COL5A2P05997 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC27.7■■■□□ 2.02
COL5A2P05997 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC27.69■■■□□ 2.02
COL5A2P05997 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC27.69■■■□□ 2.02
COL5A2P05997 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC27.69■■■□□ 2.02
COL5A2P05997 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
COL5A2P05997 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC27.69■■■□□ 2.02
COL5A2P05997 AC133681.1-201ENST00000465482 601 ntBASIC27.69■■■□□ 2.02
COL5A2P05997 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC27.69■■■□□ 2.02
COL5A2P05997 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
COL5A2P05997 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC27.69■■■□□ 2.02
COL5A2P05997 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC27.69■■■□□ 2.02
COL5A2P05997 NXN-202ENST00000537628 1340 ntTSL 3 BASIC27.68■■■□□ 2.02
COL5A2P05997 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
COL5A2P05997 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC27.68■■■□□ 2.02
COL5A2P05997 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
COL5A2P05997 ABHD17AP6-201ENST00000458502 1044 ntBASIC27.68■■■□□ 2.02
COL5A2P05997 DHDH-203ENST00000522614 776 ntTSL 5 BASIC27.68■■■□□ 2.02
COL5A2P05997 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
COL5A2P05997 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
COL5A2P05997 AL049637.2-201ENST00000641778 930 ntBASIC27.68■■■□□ 2.02
COL5A2P05997 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC27.68■■■□□ 2.02
COL5A2P05997 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC27.68■■■□□ 2.02
COL5A2P05997 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC27.67■■■□□ 2.02
COL5A2P05997 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC27.67■■■□□ 2.02
COL5A2P05997 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC27.67■■■□□ 2.02
COL5A2P05997 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
COL5A2P05997 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC27.67■■■□□ 2.02
COL5A2P05997 LY6E-205ENST00000519611 635 ntTSL 3 BASIC27.67■■■□□ 2.02
COL5A2P05997 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC27.67■■■□□ 2.02
COL5A2P05997 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC27.67■■■□□ 2.02
COL5A2P05997 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC27.67■■■□□ 2.02
COL5A2P05997 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC27.67■■■□□ 2.02
COL5A2P05997 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
COL5A2P05997 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
COL5A2P05997 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
COL5A2P05997 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
COL5A2P05997 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
COL5A2P05997 AC068473.5-201ENST00000616428 2072 ntBASIC27.67■■■□□ 2.02
COL5A2P05997 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
COL5A2P05997 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC27.67■■■□□ 2.02
COL5A2P05997 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
COL5A2P05997 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC27.66■■■□□ 2.02
COL5A2P05997 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC27.66■■■□□ 2.02
COL5A2P05997 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC27.66■■■□□ 2.02
COL5A2P05997 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC27.66■■■□□ 2.02
COL5A2P05997 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC27.66■■■□□ 2.02
COL5A2P05997 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC27.66■■■□□ 2.02
COL5A2P05997 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
COL5A2P05997 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC27.66■■■□□ 2.02
COL5A2P05997 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC27.66■■■□□ 2.02
COL5A2P05997 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC27.66■■■□□ 2.02
COL5A2P05997 AC092053.2-201ENST00000640557 1818 ntBASIC27.66■■■□□ 2.02
COL5A2P05997 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC27.66■■■□□ 2.02
COL5A2P05997 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC27.66■■■□□ 2.02
COL5A2P05997 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
COL5A2P05997 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
COL5A2P05997 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC27.65■■■□□ 2.02
COL5A2P05997 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC27.65■■■□□ 2.02
COL5A2P05997 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
COL5A2P05997 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
COL5A2P05997 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC27.65■■■□□ 2.02
COL5A2P05997 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC27.65■■■□□ 2.02
COL5A2P05997 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
COL5A2P05997 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC27.65■■■□□ 2.02
COL5A2P05997 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC27.65■■■□□ 2.02
COL5A2P05997 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC27.65■■■□□ 2.02
COL5A2P05997 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
COL5A2P05997 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
COL5A2P05997 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC27.65■■■□□ 2.02
COL5A2P05997 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
COL5A2P05997 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC27.64■■■□□ 2.02
COL5A2P05997 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC27.64■■■□□ 2.02
COL5A2P05997 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
COL5A2P05997 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC27.64■■■□□ 2.02
COL5A2P05997 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC27.64■■■□□ 2.02
COL5A2P05997 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC27.64■■■□□ 2.02
COL5A2P05997 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
COL5A2P05997 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
COL5A2P05997 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
COL5A2P05997 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
COL5A2P05997 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
COL5A2P05997 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms