Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
POLR3DP05423 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC24.86■■□□□ 1.57
POLR3DP05423 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
POLR3DP05423 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
POLR3DP05423 AC093787.1-201ENST00000450396 207 ntBASIC24.86■■□□□ 1.57
POLR3DP05423 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC24.86■■□□□ 1.57
POLR3DP05423 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
POLR3DP05423 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
POLR3DP05423 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
POLR3DP05423 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
POLR3DP05423 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
POLR3DP05423 MKRN4P-201ENST00000444706 1521 ntBASIC24.86■■□□□ 1.57
POLR3DP05423 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
POLR3DP05423 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC24.85■■□□□ 1.57
POLR3DP05423 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC24.85■■□□□ 1.57
POLR3DP05423 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
POLR3DP05423 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
POLR3DP05423 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
POLR3DP05423 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC24.85■■□□□ 1.57
POLR3DP05423 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
POLR3DP05423 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
POLR3DP05423 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
POLR3DP05423 AC245052.3-201ENST00000450182 901 ntBASIC24.85■■□□□ 1.57
POLR3DP05423 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
POLR3DP05423 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC24.85■■□□□ 1.57
POLR3DP05423 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC24.85■■□□□ 1.57
POLR3DP05423 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC24.85■■□□□ 1.57
POLR3DP05423 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
POLR3DP05423 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
POLR3DP05423 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC24.85■■□□□ 1.57
POLR3DP05423 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC24.85■■□□□ 1.57
POLR3DP05423 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC24.85■■□□□ 1.57
POLR3DP05423 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
POLR3DP05423 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
POLR3DP05423 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
POLR3DP05423 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
POLR3DP05423 PHB2-213ENST00000546111 858 ntTSL 2 BASIC24.84■■□□□ 1.57
POLR3DP05423 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC24.84■■□□□ 1.57
POLR3DP05423 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC24.84■■□□□ 1.57
POLR3DP05423 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC24.84■■□□□ 1.57
POLR3DP05423 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC24.84■■□□□ 1.57
POLR3DP05423 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
POLR3DP05423 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
POLR3DP05423 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
POLR3DP05423 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
POLR3DP05423 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC24.83■■□□□ 1.57
POLR3DP05423 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC24.83■■□□□ 1.57
POLR3DP05423 AL162412.1-201ENST00000567129 965 ntBASIC24.83■■□□□ 1.57
POLR3DP05423 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
POLR3DP05423 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
POLR3DP05423 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.56
POLR3DP05423 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
POLR3DP05423 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
POLR3DP05423 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
POLR3DP05423 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
POLR3DP05423 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC24.82■■□□□ 1.56
POLR3DP05423 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC24.82■■□□□ 1.56
POLR3DP05423 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
POLR3DP05423 AL512625.2-201ENST00000417533 625 ntBASIC24.82■■□□□ 1.56
POLR3DP05423 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC24.82■■□□□ 1.56
POLR3DP05423 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC24.82■■□□□ 1.56
POLR3DP05423 CD44-222ENST00000526025 1052 ntTSL 2 BASIC24.82■■□□□ 1.56
POLR3DP05423 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
POLR3DP05423 AL137060.1-201ENST00000618151 2648 ntBASIC24.82■■□□□ 1.56
POLR3DP05423 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC24.82■■□□□ 1.56
POLR3DP05423 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC24.81■■□□□ 1.56
POLR3DP05423 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
POLR3DP05423 EFS-203ENST00000429593 2610 ntTSL 2 BASIC24.81■■□□□ 1.56
POLR3DP05423 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
POLR3DP05423 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC24.81■■□□□ 1.56
POLR3DP05423 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC24.81■■□□□ 1.56
POLR3DP05423 MIPEPP3-201ENST00000412105 444 ntBASIC24.81■■□□□ 1.56
POLR3DP05423 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
POLR3DP05423 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC24.81■■□□□ 1.56
POLR3DP05423 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC24.81■■□□□ 1.56
POLR3DP05423 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
POLR3DP05423 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
POLR3DP05423 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
POLR3DP05423 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
POLR3DP05423 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC24.81■■□□□ 1.56
POLR3DP05423 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC24.81■■□□□ 1.56
POLR3DP05423 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
POLR3DP05423 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
POLR3DP05423 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
POLR3DP05423 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
POLR3DP05423 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
POLR3DP05423 GOLGA2P6-201ENST00000340929 2049 ntBASIC24.8■■□□□ 1.56
POLR3DP05423 AC091799.1-201ENST00000422823 811 ntBASIC24.8■■□□□ 1.56
POLR3DP05423 PBX1-209ENST00000485769 834 ntTSL 2 BASIC24.8■■□□□ 1.56
POLR3DP05423 RGMA-211ENST00000557420 989 ntTSL 3 BASIC24.8■■□□□ 1.56
POLR3DP05423 KLF13-207ENST00000560473 489 ntTSL 3 BASIC24.8■■□□□ 1.56
POLR3DP05423 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC24.8■■□□□ 1.56
POLR3DP05423 MARS-234ENST00000630571 216 ntTSL 5 BASIC24.8■■□□□ 1.56
POLR3DP05423 MARS-235ENST00000630803 183 ntTSL 3 BASIC24.8■■□□□ 1.56
POLR3DP05423 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
POLR3DP05423 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC24.8■■□□□ 1.56
POLR3DP05423 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
POLR3DP05423 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
POLR3DP05423 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC24.8■■□□□ 1.56
POLR3DP05423 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms