Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
APOEP02649 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.77■■□□□ 1.08
APOEP02649 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
APOEP02649 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.77■■□□□ 1.08
APOEP02649 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.77■■□□□ 1.08
APOEP02649 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.77■■□□□ 1.08
APOEP02649 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.77■■□□□ 1.08
APOEP02649 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
APOEP02649 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
APOEP02649 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.77■■□□□ 1.07
APOEP02649 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
APOEP02649 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
APOEP02649 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
APOEP02649 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
APOEP02649 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
APOEP02649 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
APOEP02649 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
APOEP02649 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
APOEP02649 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
APOEP02649 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
APOEP02649 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
APOEP02649 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.75■■□□□ 1.07
APOEP02649 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.75■■□□□ 1.07
APOEP02649 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
APOEP02649 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.75■■□□□ 1.07
APOEP02649 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
APOEP02649 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
APOEP02649 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
APOEP02649 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
APOEP02649 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.75■■□□□ 1.07
APOEP02649 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.75■■□□□ 1.07
APOEP02649 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.75■■□□□ 1.07
APOEP02649 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
APOEP02649 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
APOEP02649 AC005229.4-201ENST00000610085 2198 ntBASIC21.75■■□□□ 1.07
APOEP02649 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
APOEP02649 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
APOEP02649 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
APOEP02649 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
APOEP02649 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
APOEP02649 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
APOEP02649 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
APOEP02649 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
APOEP02649 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.74■■□□□ 1.07
APOEP02649 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
APOEP02649 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.74■■□□□ 1.07
APOEP02649 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.74■■□□□ 1.07
APOEP02649 AC010536.3-201ENST00000620306 533 ntBASIC21.74■■□□□ 1.07
APOEP02649 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.74■■□□□ 1.07
APOEP02649 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
APOEP02649 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
APOEP02649 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
APOEP02649 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.73■■□□□ 1.07
APOEP02649 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
APOEP02649 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
APOEP02649 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
APOEP02649 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.73■■□□□ 1.07
APOEP02649 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
APOEP02649 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
APOEP02649 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.73■■□□□ 1.07
APOEP02649 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
APOEP02649 Z98882.1-201ENST00000622160 2253 ntBASIC21.73■■□□□ 1.07
APOEP02649 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
APOEP02649 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
APOEP02649 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
APOEP02649 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.73■■□□□ 1.07
APOEP02649 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
APOEP02649 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
APOEP02649 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
APOEP02649 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
APOEP02649 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
APOEP02649 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.72■■□□□ 1.07
APOEP02649 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.72■■□□□ 1.07
APOEP02649 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
APOEP02649 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
APOEP02649 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.72■■□□□ 1.07
APOEP02649 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
APOEP02649 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
APOEP02649 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.72■■□□□ 1.07
APOEP02649 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.72■■□□□ 1.07
APOEP02649 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.72■■□□□ 1.07
APOEP02649 RARRES2P11-201ENST00000635158 484 ntBASIC21.72■■□□□ 1.07
APOEP02649 AC073111.5-205ENST00000641717 521 ntBASIC21.72■■□□□ 1.07
APOEP02649 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
APOEP02649 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.72■■□□□ 1.07
APOEP02649 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
APOEP02649 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
APOEP02649 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.72■■□□□ 1.07
APOEP02649 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.72■■□□□ 1.07
APOEP02649 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.71■■□□□ 1.07
APOEP02649 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
APOEP02649 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
APOEP02649 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
APOEP02649 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
APOEP02649 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.71■■□□□ 1.07
APOEP02649 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
APOEP02649 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
APOEP02649 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
APOEP02649 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
APOEP02649 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms