Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.5■□□□□ 0.39
HLA-AP01891 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
HLA-AP01891 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.5■□□□□ 0.39
HLA-AP01891 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.5■□□□□ 0.39
HLA-AP01891 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-AP01891 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-AP01891 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HLA-AP01891 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.5■□□□□ 0.39
HLA-AP01891 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-AP01891 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
HLA-AP01891 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
HLA-AP01891 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-AP01891 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-AP01891 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-AP01891 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-AP01891 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.49■□□□□ 0.39
HLA-AP01891 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-AP01891 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HLA-AP01891 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.49■□□□□ 0.39
HLA-AP01891 AC020907.5-201ENST00000624372 1936 ntBASIC17.49■□□□□ 0.39
HLA-AP01891 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-AP01891 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-AP01891 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-AP01891 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.49■□□□□ 0.39
HLA-AP01891 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.49■□□□□ 0.39
HLA-AP01891 KRT16P3-201ENST00000439127 1283 ntBASIC17.49■□□□□ 0.39
HLA-AP01891 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.49■□□□□ 0.39
HLA-AP01891 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.49■□□□□ 0.39
HLA-AP01891 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.49■□□□□ 0.39
HLA-AP01891 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-AP01891 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.49■□□□□ 0.39
HLA-AP01891 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.49■□□□□ 0.39
HLA-AP01891 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-AP01891 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-AP01891 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.49■□□□□ 0.39
HLA-AP01891 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-AP01891 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-AP01891 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.49■□□□□ 0.39
HLA-AP01891 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
HLA-AP01891 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-AP01891 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HLA-AP01891 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-AP01891 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-AP01891 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.48■□□□□ 0.39
HLA-AP01891 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.48■□□□□ 0.39
HLA-AP01891 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-AP01891 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.48■□□□□ 0.39
HLA-AP01891 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.48■□□□□ 0.39
HLA-AP01891 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-AP01891 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-AP01891 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-AP01891 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-AP01891 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.48■□□□□ 0.39
HLA-AP01891 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
HLA-AP01891 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-AP01891 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-AP01891 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-AP01891 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-AP01891 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-AP01891 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-AP01891 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
HLA-AP01891 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-AP01891 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.47■□□□□ 0.39
HLA-AP01891 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-AP01891 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-AP01891 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.47■□□□□ 0.39
HLA-AP01891 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-AP01891 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-AP01891 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-AP01891 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
HLA-AP01891 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-AP01891 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HLA-AP01891 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-AP01891 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-AP01891 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
HLA-AP01891 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.47■□□□□ 0.39
HLA-AP01891 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-AP01891 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-AP01891 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-AP01891 AC003102.1-202ENST00000563394 1796 ntBASIC17.46■□□□□ 0.39
HLA-AP01891 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-AP01891 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-AP01891 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-AP01891 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-AP01891 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.46■□□□□ 0.39
HLA-AP01891 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.46■□□□□ 0.39
HLA-AP01891 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
HLA-AP01891 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-AP01891 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.46■□□□□ 0.39
HLA-AP01891 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-AP01891 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-AP01891 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-AP01891 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-AP01891 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.46■□□□□ 0.39
HLA-AP01891 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
HLA-AP01891 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
HLA-AP01891 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
HLA-AP01891 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
HLA-AP01891 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-AP01891 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms