Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN1O95832 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN1O95832 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN1O95832 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN1O95832 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN1O95832 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CLDN1O95832 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
CLDN1O95832 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
CLDN1O95832 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.57■□□□□ 0.56
CLDN1O95832 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN1O95832 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.56■□□□□ 0.56
CLDN1O95832 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN1O95832 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN1O95832 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.56■□□□□ 0.56
CLDN1O95832 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN1O95832 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN1O95832 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CLDN1O95832 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.56■□□□□ 0.56
CLDN1O95832 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.56■□□□□ 0.56
CLDN1O95832 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.56■□□□□ 0.56
CLDN1O95832 RN7SL471P-201ENST00000580476 299 ntBASIC18.56■□□□□ 0.56
CLDN1O95832 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.56■□□□□ 0.56
CLDN1O95832 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN1O95832 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN1O95832 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN1O95832 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN1O95832 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN1O95832 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.56■□□□□ 0.56
CLDN1O95832 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN1O95832 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN1O95832 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.55■□□□□ 0.56
CLDN1O95832 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CLDN1O95832 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
CLDN1O95832 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CLDN1O95832 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN1O95832 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN1O95832 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.55■□□□□ 0.56
CLDN1O95832 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN1O95832 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.55■□□□□ 0.56
CLDN1O95832 AC060766.5-201ENST00000590539 871 ntBASIC18.55■□□□□ 0.56
CLDN1O95832 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.55■□□□□ 0.56
CLDN1O95832 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN1O95832 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.55■□□□□ 0.56
CLDN1O95832 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CLDN1O95832 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN1O95832 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN1O95832 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN1O95832 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CLDN1O95832 AL117328.2-201ENST00000624617 1940 ntBASIC18.55■□□□□ 0.56
CLDN1O95832 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN1O95832 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.54■□□□□ 0.56
CLDN1O95832 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN1O95832 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN1O95832 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
CLDN1O95832 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CLDN1O95832 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN1O95832 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN1O95832 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN1O95832 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
CLDN1O95832 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.54■□□□□ 0.56
CLDN1O95832 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CLDN1O95832 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CLDN1O95832 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.54■□□□□ 0.56
CLDN1O95832 AC120498.10-201ENST00000621827 505 ntBASIC18.54■□□□□ 0.56
CLDN1O95832 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN1O95832 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN1O95832 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN1O95832 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN1O95832 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN1O95832 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.53■□□□□ 0.56
CLDN1O95832 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CLDN1O95832 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
CLDN1O95832 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.53■□□□□ 0.56
CLDN1O95832 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN1O95832 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.53■□□□□ 0.56
CLDN1O95832 AC233263.1-201ENST00000578059 224 ntBASIC18.53■□□□□ 0.56
CLDN1O95832 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.53■□□□□ 0.56
CLDN1O95832 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.53■□□□□ 0.56
CLDN1O95832 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.53■□□□□ 0.56
CLDN1O95832 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN1O95832 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.52■□□□□ 0.56
CLDN1O95832 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.52■□□□□ 0.56
CLDN1O95832 RBM17P2-201ENST00000616397 1405 ntBASIC18.52■□□□□ 0.56
CLDN1O95832 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN1O95832 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.52■□□□□ 0.56
CLDN1O95832 KRT17P3-201ENST00000420566 1262 ntBASIC18.52■□□□□ 0.56
CLDN1O95832 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.52■□□□□ 0.56
CLDN1O95832 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.52■□□□□ 0.56
CLDN1O95832 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.52■□□□□ 0.56
CLDN1O95832 HLA-B-256ENST00000639848 1089 ntBASIC18.52■□□□□ 0.56
CLDN1O95832 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN1O95832 KRT17P1-201ENST00000399211 1546 ntBASIC18.52■□□□□ 0.56
CLDN1O95832 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CLDN1O95832 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CLDN1O95832 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
CLDN1O95832 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CLDN1O95832 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.51■□□□□ 0.55
CLDN1O95832 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.51■□□□□ 0.55
CLDN1O95832 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN1O95832 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms