Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
ABCA1O95477 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ABCA1O95477 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.38■□□□□ 0.37
ABCA1O95477 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ABCA1O95477 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.38■□□□□ 0.37
ABCA1O95477 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ABCA1O95477 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
ABCA1O95477 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ABCA1O95477 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.38■□□□□ 0.37
ABCA1O95477 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.38■□□□□ 0.37
ABCA1O95477 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
ABCA1O95477 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.38■□□□□ 0.37
ABCA1O95477 AL355472.2-201ENST00000422958 438 ntBASIC17.38■□□□□ 0.37
ABCA1O95477 UBE2SP1-201ENST00000450587 669 ntBASIC17.38■□□□□ 0.37
ABCA1O95477 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ABCA1O95477 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.38■□□□□ 0.37
ABCA1O95477 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.38■□□□□ 0.37
ABCA1O95477 AL591742.1-201ENST00000604433 565 ntBASIC17.38■□□□□ 0.37
ABCA1O95477 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.38■□□□□ 0.37
ABCA1O95477 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ABCA1O95477 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ABCA1O95477 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ABCA1O95477 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.37■□□□□ 0.37
ABCA1O95477 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ABCA1O95477 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.37■□□□□ 0.37
ABCA1O95477 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ABCA1O95477 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ABCA1O95477 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
ABCA1O95477 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ABCA1O95477 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.37■□□□□ 0.37
ABCA1O95477 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ABCA1O95477 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ABCA1O95477 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
ABCA1O95477 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ABCA1O95477 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.37■□□□□ 0.37
ABCA1O95477 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.37■□□□□ 0.37
ABCA1O95477 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ABCA1O95477 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ABCA1O95477 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
ABCA1O95477 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ABCA1O95477 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.37■□□□□ 0.37
ABCA1O95477 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.37■□□□□ 0.37
ABCA1O95477 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
ABCA1O95477 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
ABCA1O95477 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ABCA1O95477 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ABCA1O95477 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.36■□□□□ 0.37
ABCA1O95477 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ABCA1O95477 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.36■□□□□ 0.37
ABCA1O95477 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ABCA1O95477 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ABCA1O95477 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ABCA1O95477 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ABCA1O95477 ECEL1P3-201ENST00000427961 737 ntBASIC17.36■□□□□ 0.37
ABCA1O95477 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.36■□□□□ 0.37
ABCA1O95477 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.36■□□□□ 0.37
ABCA1O95477 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.36■□□□□ 0.37
ABCA1O95477 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ABCA1O95477 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ABCA1O95477 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ABCA1O95477 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ABCA1O95477 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ABCA1O95477 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.36■□□□□ 0.37
ABCA1O95477 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.36■□□□□ 0.37
ABCA1O95477 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.36■□□□□ 0.37
ABCA1O95477 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ABCA1O95477 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.36■□□□□ 0.37
ABCA1O95477 AC087742.1-201ENST00000575880 1738 ntBASIC17.36■□□□□ 0.37
ABCA1O95477 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ABCA1O95477 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ABCA1O95477 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.36■□□□□ 0.37
ABCA1O95477 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ABCA1O95477 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ABCA1O95477 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ABCA1O95477 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ABCA1O95477 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.35■□□□□ 0.37
ABCA1O95477 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ABCA1O95477 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ABCA1O95477 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.35■□□□□ 0.37
ABCA1O95477 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.35■□□□□ 0.37
ABCA1O95477 AL117328.2-201ENST00000624617 1940 ntBASIC17.35■□□□□ 0.37
ABCA1O95477 LINC00565-201ENST00000562710 2331 ntBASIC17.35■□□□□ 0.37
ABCA1O95477 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.35■□□□□ 0.37
ABCA1O95477 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ABCA1O95477 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ABCA1O95477 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ABCA1O95477 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ABCA1O95477 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ABCA1O95477 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ABCA1O95477 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ABCA1O95477 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ABCA1O95477 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ABCA1O95477 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.35■□□□□ 0.37
ABCA1O95477 AC243732.1-201ENST00000612648 864 ntBASIC17.35■□□□□ 0.37
ABCA1O95477 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ABCA1O95477 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.35■□□□□ 0.37
ABCA1O95477 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ABCA1O95477 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.34■□□□□ 0.37
ABCA1O95477 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.34■□□□□ 0.37
ABCA1O95477 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms