Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
VAPBO95292 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VAPBO95292 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VAPBO95292 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VAPBO95292 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.85■□□□□ 0.93
VAPBO95292 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
VAPBO95292 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.85■□□□□ 0.93
VAPBO95292 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VAPBO95292 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.85■□□□□ 0.93
VAPBO95292 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
VAPBO95292 POU5F1P4-201ENST00000413175 1085 ntBASIC20.85■□□□□ 0.93
VAPBO95292 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VAPBO95292 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.85■□□□□ 0.93
VAPBO95292 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.85■□□□□ 0.93
VAPBO95292 AC138907.5-202ENST00000569484 235 ntBASIC20.85■□□□□ 0.93
VAPBO95292 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VAPBO95292 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VAPBO95292 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VAPBO95292 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
VAPBO95292 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VAPBO95292 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VAPBO95292 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VAPBO95292 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
VAPBO95292 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
VAPBO95292 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VAPBO95292 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.85■□□□□ 0.93
VAPBO95292 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VAPBO95292 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VAPBO95292 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
VAPBO95292 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
VAPBO95292 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.84■□□□□ 0.93
VAPBO95292 TERF1P2-201ENST00000583350 1212 ntBASIC20.84■□□□□ 0.93
VAPBO95292 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.84■□□□□ 0.93
VAPBO95292 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.84■□□□□ 0.93
VAPBO95292 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VAPBO95292 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VAPBO95292 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VAPBO95292 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
VAPBO95292 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VAPBO95292 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
VAPBO95292 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.83■□□□□ 0.93
VAPBO95292 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.83■□□□□ 0.93
VAPBO95292 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VAPBO95292 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
VAPBO95292 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VAPBO95292 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.83■□□□□ 0.93
VAPBO95292 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VAPBO95292 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.83■□□□□ 0.93
VAPBO95292 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.83■□□□□ 0.93
VAPBO95292 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VAPBO95292 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
VAPBO95292 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
VAPBO95292 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
VAPBO95292 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
VAPBO95292 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
VAPBO95292 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
VAPBO95292 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.83■□□□□ 0.92
VAPBO95292 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
VAPBO95292 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
VAPBO95292 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
VAPBO95292 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.82■□□□□ 0.92
VAPBO95292 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VAPBO95292 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
VAPBO95292 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VAPBO95292 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.82■□□□□ 0.92
VAPBO95292 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.82■□□□□ 0.92
VAPBO95292 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VAPBO95292 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
VAPBO95292 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
VAPBO95292 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.82■□□□□ 0.92
VAPBO95292 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VAPBO95292 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.82■□□□□ 0.92
VAPBO95292 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.82■□□□□ 0.92
VAPBO95292 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.82■□□□□ 0.92
VAPBO95292 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.82■□□□□ 0.92
VAPBO95292 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.82■□□□□ 0.92
VAPBO95292 CCDC92B-201ENST00000575506 885 ntBASIC20.82■□□□□ 0.92
VAPBO95292 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VAPBO95292 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VAPBO95292 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
VAPBO95292 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
VAPBO95292 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
VAPBO95292 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VAPBO95292 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
VAPBO95292 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VAPBO95292 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VAPBO95292 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VAPBO95292 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VAPBO95292 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.81■□□□□ 0.92
VAPBO95292 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VAPBO95292 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.81■□□□□ 0.92
VAPBO95292 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
VAPBO95292 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.81■□□□□ 0.92
VAPBO95292 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VAPBO95292 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VAPBO95292 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.81■□□□□ 0.92
VAPBO95292 AC104187.1-201ENST00000607510 612 ntBASIC20.81■□□□□ 0.92
VAPBO95292 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.81■□□□□ 0.92
VAPBO95292 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.81■□□□□ 0.92
VAPBO95292 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms