Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SCAF4O95104 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SCAF4O95104 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SCAF4O95104 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SCAF4O95104 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.94■□□□□ 0.3
SCAF4O95104 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SCAF4O95104 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
SCAF4O95104 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCAF4O95104 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCAF4O95104 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.93■□□□□ 0.3
SCAF4O95104 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
SCAF4O95104 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.93■□□□□ 0.3
SCAF4O95104 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCAF4O95104 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCAF4O95104 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.93■□□□□ 0.3
SCAF4O95104 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.93■□□□□ 0.3
SCAF4O95104 GABARAPL3-202ENST00000624044 1851 ntBASIC16.93■□□□□ 0.3
SCAF4O95104 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCAF4O95104 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCAF4O95104 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SCAF4O95104 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.93■□□□□ 0.3
SCAF4O95104 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.93■□□□□ 0.3
SCAF4O95104 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCAF4O95104 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCAF4O95104 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCAF4O95104 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCAF4O95104 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCAF4O95104 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SCAF4O95104 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SCAF4O95104 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCAF4O95104 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCAF4O95104 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SCAF4O95104 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SCAF4O95104 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SCAF4O95104 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCAF4O95104 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SCAF4O95104 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCAF4O95104 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCAF4O95104 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.92■□□□□ 0.3
SCAF4O95104 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SCAF4O95104 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SCAF4O95104 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.92■□□□□ 0.3
SCAF4O95104 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC16.92■□□□□ 0.3
SCAF4O95104 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC16.92■□□□□ 0.3
SCAF4O95104 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SCAF4O95104 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCAF4O95104 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCAF4O95104 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.92■□□□□ 0.3
SCAF4O95104 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCAF4O95104 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCAF4O95104 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCAF4O95104 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCAF4O95104 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC16.91■□□□□ 0.3
SCAF4O95104 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC16.91■□□□□ 0.3
SCAF4O95104 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
SCAF4O95104 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SCAF4O95104 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCAF4O95104 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.91■□□□□ 0.3
SCAF4O95104 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCAF4O95104 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCAF4O95104 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCAF4O95104 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.91■□□□□ 0.3
SCAF4O95104 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCAF4O95104 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCAF4O95104 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SCAF4O95104 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SCAF4O95104 RBM38-205ENST00000440234 686 ntTSL 2 BASIC16.91■□□□□ 0.3
SCAF4O95104 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC16.91■□□□□ 0.3
SCAF4O95104 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.91■□□□□ 0.3
SCAF4O95104 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC16.91■□□□□ 0.3
SCAF4O95104 AC099791.2-201ENST00000605725 427 ntBASIC16.91■□□□□ 0.3
SCAF4O95104 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SCAF4O95104 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.91■□□□□ 0.3
SCAF4O95104 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SCAF4O95104 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCAF4O95104 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SCAF4O95104 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.91■□□□□ 0.3
SCAF4O95104 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SCAF4O95104 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.91■□□□□ 0.3
SCAF4O95104 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SCAF4O95104 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCAF4O95104 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SCAF4O95104 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCAF4O95104 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCAF4O95104 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.9■□□□□ 0.3
SCAF4O95104 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCAF4O95104 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCAF4O95104 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCAF4O95104 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCAF4O95104 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCAF4O95104 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC16.9■□□□□ 0.3
SCAF4O95104 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCAF4O95104 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.9■□□□□ 0.3
SCAF4O95104 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCAF4O95104 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC16.9■□□□□ 0.3
SCAF4O95104 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC16.9■□□□□ 0.3
SCAF4O95104 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC16.9■□□□□ 0.3
SCAF4O95104 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SCAF4O95104 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SCAF4O95104 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms