Protein–RNA interactions for Protein: O76064

RNF8, E3 ubiquitin-protein ligase RNF8, humanhuman

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF8O76064 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF8O76064 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF8O76064 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF8O76064 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RNF8O76064 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
RNF8O76064 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RNF8O76064 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RNF8O76064 AC010141.2-201ENST00000452426 721 ntBASIC21.8■■□□□ 1.08
RNF8O76064 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.8■■□□□ 1.08
RNF8O76064 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.8■■□□□ 1.08
RNF8O76064 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.8■■□□□ 1.08
RNF8O76064 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF8O76064 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RNF8O76064 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.8■■□□□ 1.08
RNF8O76064 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RNF8O76064 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF8O76064 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF8O76064 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF8O76064 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.79■■□□□ 1.08
RNF8O76064 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RNF8O76064 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF8O76064 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF8O76064 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RNF8O76064 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
RNF8O76064 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF8O76064 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF8O76064 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.79■■□□□ 1.08
RNF8O76064 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.79■■□□□ 1.08
RNF8O76064 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF8O76064 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF8O76064 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF8O76064 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
RNF8O76064 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF8O76064 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
RNF8O76064 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF8O76064 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RNF8O76064 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.78■■□□□ 1.08
RNF8O76064 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF8O76064 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF8O76064 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF8O76064 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RNF8O76064 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.78■■□□□ 1.08
RNF8O76064 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF8O76064 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.78■■□□□ 1.08
RNF8O76064 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF8O76064 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
RNF8O76064 KRT16P2-201ENST00000414673 1423 ntBASIC21.78■■□□□ 1.08
RNF8O76064 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF8O76064 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.78■■□□□ 1.08
RNF8O76064 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF8O76064 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF8O76064 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RNF8O76064 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RNF8O76064 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RNF8O76064 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.77■■□□□ 1.08
RNF8O76064 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.77■■□□□ 1.08
RNF8O76064 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF8O76064 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RNF8O76064 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF8O76064 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.77■■□□□ 1.08
RNF8O76064 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
RNF8O76064 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.77■■□□□ 1.08
RNF8O76064 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RNF8O76064 AP001160.3-201ENST00000601484 763 ntBASIC21.77■■□□□ 1.08
RNF8O76064 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
RNF8O76064 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF8O76064 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.77■■□□□ 1.08
RNF8O76064 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RNF8O76064 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
RNF8O76064 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RNF8O76064 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF8O76064 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF8O76064 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
RNF8O76064 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RNF8O76064 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF8O76064 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF8O76064 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.76■■□□□ 1.07
RNF8O76064 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF8O76064 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RNF8O76064 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RNF8O76064 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.76■■□□□ 1.07
RNF8O76064 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF8O76064 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
RNF8O76064 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF8O76064 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF8O76064 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RNF8O76064 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF8O76064 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.76■■□□□ 1.07
RNF8O76064 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.76■■□□□ 1.07
RNF8O76064 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF8O76064 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF8O76064 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RNF8O76064 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RNF8O76064 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF8O76064 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
RNF8O76064 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RNF8O76064 AC004854.2-201ENST00000608450 1441 ntBASIC21.75■■□□□ 1.07
RNF8O76064 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF8O76064 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
RNF8O76064 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms