Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CLDN11O75508 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.32■■□□□ 1
CLDN11O75508 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.32■■□□□ 1
CLDN11O75508 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CLDN11O75508 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CLDN11O75508 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLDN11O75508 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.31■■□□□ 1
CLDN11O75508 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
CLDN11O75508 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.31■■□□□ 1
CLDN11O75508 OR10C1-204ENST00000622521 1039 ntBASIC21.31■■□□□ 1
CLDN11O75508 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLDN11O75508 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLDN11O75508 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLDN11O75508 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLDN11O75508 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CLDN11O75508 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CLDN11O75508 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CLDN11O75508 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CLDN11O75508 GPX1P1-201ENST00000388829 606 ntBASIC21.3■■□□□ 1
CLDN11O75508 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.3■■□□□ 1
CLDN11O75508 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.3■■□□□ 1
CLDN11O75508 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.3■■□□□ 1
CLDN11O75508 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.3■■□□□ 1
CLDN11O75508 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.3■■□□□ 1
CLDN11O75508 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.3■■□□□ 1
CLDN11O75508 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CLDN11O75508 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.3■■□□□ 1
CLDN11O75508 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CLDN11O75508 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.3■■□□□ 1
CLDN11O75508 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.3■■□□□ 1
CLDN11O75508 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.29■■□□□ 1
CLDN11O75508 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
CLDN11O75508 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLDN11O75508 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CLDN11O75508 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLDN11O75508 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLDN11O75508 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLDN11O75508 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CLDN11O75508 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLDN11O75508 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CLDN11O75508 AC083906.2-201ENST00000511578 360 ntBASIC21.29■■□□□ 1
CLDN11O75508 AF201337.1-201ENST00000520239 748 ntBASIC21.29■■□□□ 1
CLDN11O75508 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CLDN11O75508 FAM21FP-204ENST00000608637 956 ntBASIC21.29■■□□□ 1
CLDN11O75508 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.29■■□□□ 1
CLDN11O75508 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLDN11O75508 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
CLDN11O75508 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLDN11O75508 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLDN11O75508 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN11O75508 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.28■■□□□ 1
CLDN11O75508 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN11O75508 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.28■■□□□ 1
CLDN11O75508 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.28■■□□□ 1
CLDN11O75508 RARRES2P4-201ENST00000514074 484 ntBASIC21.28■■□□□ 1
CLDN11O75508 AC016405.3-201ENST00000607710 860 ntBASIC21.28■■□□□ 1
CLDN11O75508 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.28■■□□□ 1
CLDN11O75508 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN11O75508 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.28■■□□□ 1
CLDN11O75508 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN11O75508 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN11O75508 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.28■■□□□ 1
CLDN11O75508 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN11O75508 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.28■■□□□ 1
CLDN11O75508 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.28■■□□□ 1
CLDN11O75508 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN11O75508 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.28■■□□□ 1
CLDN11O75508 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.27■■□□□ 1
CLDN11O75508 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CLDN11O75508 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.27■■□□□ 1
CLDN11O75508 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.27■■□□□ 1
CLDN11O75508 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLDN11O75508 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.27■■□□□ 1
CLDN11O75508 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.27■■□□□ 1
CLDN11O75508 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLDN11O75508 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CLDN11O75508 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.27■■□□□ 1
CLDN11O75508 HLA-L-209ENST00000420110 1011 ntBASIC21.27■■□□□ 1
CLDN11O75508 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.27■■□□□ 1
CLDN11O75508 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.27■■□□□ 1
CLDN11O75508 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.27■■□□□ 1
CLDN11O75508 AC105036.2-201ENST00000569468 176 ntBASIC21.27■■□□□ 1
CLDN11O75508 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.27■■□□□ 1
CLDN11O75508 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.27■■□□□ 1
CLDN11O75508 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.27■■□□□ 1
CLDN11O75508 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.27■□□□□ 0.99
CLDN11O75508 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CLDN11O75508 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.26■□□□□ 0.99
CLDN11O75508 AC116050.2-201ENST00000612102 1779 ntBASIC21.26■□□□□ 0.99
CLDN11O75508 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN11O75508 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN11O75508 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.26■□□□□ 0.99
CLDN11O75508 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN11O75508 AL512625.2-201ENST00000417533 625 ntBASIC21.26■□□□□ 0.99
CLDN11O75508 AC007322.3-201ENST00000426526 701 ntBASIC21.26■□□□□ 0.99
CLDN11O75508 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
CLDN11O75508 AL109923.1-201ENST00000618799 583 ntBASIC21.26■□□□□ 0.99
CLDN11O75508 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN11O75508 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
CLDN11O75508 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms