Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GPC4O75487 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.76■□□□□ 0.91
GPC4O75487 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GPC4O75487 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
GPC4O75487 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.76■□□□□ 0.91
GPC4O75487 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.76■□□□□ 0.91
GPC4O75487 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.76■□□□□ 0.91
GPC4O75487 AC053503.5-201ENST00000601508 636 ntBASIC20.76■□□□□ 0.91
GPC4O75487 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GPC4O75487 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
GPC4O75487 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
GPC4O75487 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
GPC4O75487 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
GPC4O75487 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
GPC4O75487 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GPC4O75487 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GPC4O75487 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GPC4O75487 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
GPC4O75487 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
GPC4O75487 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GPC4O75487 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
GPC4O75487 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GPC4O75487 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GPC4O75487 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.75■□□□□ 0.91
GPC4O75487 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.75■□□□□ 0.91
GPC4O75487 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GPC4O75487 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.75■□□□□ 0.91
GPC4O75487 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
GPC4O75487 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.75■□□□□ 0.91
GPC4O75487 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.75■□□□□ 0.91
GPC4O75487 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GPC4O75487 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GPC4O75487 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GPC4O75487 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GPC4O75487 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GPC4O75487 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GPC4O75487 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
GPC4O75487 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GPC4O75487 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.75■□□□□ 0.91
GPC4O75487 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GPC4O75487 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GPC4O75487 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GPC4O75487 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.74■□□□□ 0.91
GPC4O75487 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
GPC4O75487 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
GPC4O75487 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GPC4O75487 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GPC4O75487 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
GPC4O75487 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.74■□□□□ 0.91
GPC4O75487 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
GPC4O75487 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
GPC4O75487 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
GPC4O75487 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.74■□□□□ 0.91
GPC4O75487 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.74■□□□□ 0.91
GPC4O75487 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GPC4O75487 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GPC4O75487 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GPC4O75487 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
GPC4O75487 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GPC4O75487 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.73■□□□□ 0.91
GPC4O75487 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
GPC4O75487 AC034268.1-201ENST00000441047 882 ntBASIC20.73■□□□□ 0.91
GPC4O75487 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
GPC4O75487 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.73■□□□□ 0.91
GPC4O75487 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.73■□□□□ 0.91
GPC4O75487 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GPC4O75487 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
GPC4O75487 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GPC4O75487 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.72■□□□□ 0.91
GPC4O75487 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
GPC4O75487 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
GPC4O75487 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GPC4O75487 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
GPC4O75487 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
GPC4O75487 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
GPC4O75487 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
GPC4O75487 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
GPC4O75487 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GPC4O75487 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
GPC4O75487 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.72■□□□□ 0.91
GPC4O75487 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.72■□□□□ 0.91
GPC4O75487 AP004607.4-201ENST00000530158 1459 ntBASIC20.72■□□□□ 0.91
GPC4O75487 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.72■□□□□ 0.91
GPC4O75487 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.72■□□□□ 0.91
GPC4O75487 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
GPC4O75487 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
GPC4O75487 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
GPC4O75487 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GPC4O75487 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
GPC4O75487 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
GPC4O75487 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
GPC4O75487 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GPC4O75487 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GPC4O75487 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GPC4O75487 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GPC4O75487 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GPC4O75487 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.71■□□□□ 0.91
GPC4O75487 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GPC4O75487 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.71■□□□□ 0.91
GPC4O75487 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms