Protein–RNA interactions for Protein: O75317

USP12, Ubiquitin carboxyl-terminal hydrolase 12, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP12O75317 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP12O75317 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
USP12O75317 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.22■□□□□ 0.99
USP12O75317 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
USP12O75317 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP12O75317 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP12O75317 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP12O75317 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP12O75317 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
USP12O75317 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP12O75317 KRT87P-202ENST00000534226 1464 ntBASIC21.21■□□□□ 0.99
USP12O75317 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
USP12O75317 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.21■□□□□ 0.99
USP12O75317 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP12O75317 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP12O75317 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP12O75317 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP12O75317 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP12O75317 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP12O75317 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.21■□□□□ 0.99
USP12O75317 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
USP12O75317 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.2■□□□□ 0.98
USP12O75317 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP12O75317 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
USP12O75317 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.2■□□□□ 0.98
USP12O75317 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.2■□□□□ 0.98
USP12O75317 AC006015.1-201ENST00000429970 570 ntBASIC21.2■□□□□ 0.98
USP12O75317 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.2■□□□□ 0.98
USP12O75317 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.2■□□□□ 0.98
USP12O75317 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.2■□□□□ 0.98
USP12O75317 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.2■□□□□ 0.98
USP12O75317 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
USP12O75317 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.2■□□□□ 0.98
USP12O75317 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.2■□□□□ 0.98
USP12O75317 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.2■□□□□ 0.98
USP12O75317 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP12O75317 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP12O75317 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP12O75317 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP12O75317 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.2■□□□□ 0.98
USP12O75317 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.2■□□□□ 0.98
USP12O75317 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP12O75317 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.19■□□□□ 0.98
USP12O75317 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP12O75317 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.19■□□□□ 0.98
USP12O75317 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
USP12O75317 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.19■□□□□ 0.98
USP12O75317 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.19■□□□□ 0.98
USP12O75317 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.19■□□□□ 0.98
USP12O75317 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.19■□□□□ 0.98
USP12O75317 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP12O75317 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
USP12O75317 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP12O75317 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
USP12O75317 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP12O75317 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP12O75317 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
USP12O75317 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP12O75317 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.19■□□□□ 0.98
USP12O75317 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP12O75317 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.18■□□□□ 0.98
USP12O75317 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.18■□□□□ 0.98
USP12O75317 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.18■□□□□ 0.98
USP12O75317 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.18■□□□□ 0.98
USP12O75317 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
USP12O75317 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP12O75317 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
USP12O75317 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP12O75317 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.18■□□□□ 0.98
USP12O75317 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.18■□□□□ 0.98
USP12O75317 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
USP12O75317 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP12O75317 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
USP12O75317 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP12O75317 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.17■□□□□ 0.98
USP12O75317 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP12O75317 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.17■□□□□ 0.98
USP12O75317 KRT18P61-201ENST00000585825 1298 ntBASIC21.17■□□□□ 0.98
USP12O75317 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.17■□□□□ 0.98
USP12O75317 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
USP12O75317 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
USP12O75317 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.17■□□□□ 0.98
USP12O75317 AL157384.1-201ENST00000445995 2473 ntBASIC21.17■□□□□ 0.98
USP12O75317 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP12O75317 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
USP12O75317 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
USP12O75317 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP12O75317 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP12O75317 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP12O75317 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP12O75317 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
USP12O75317 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
USP12O75317 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP12O75317 CDCA4P2-201ENST00000441182 718 ntBASIC21.16■□□□□ 0.98
USP12O75317 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.16■□□□□ 0.98
USP12O75317 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.16■□□□□ 0.98
USP12O75317 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.16■□□□□ 0.98
USP12O75317 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.16■□□□□ 0.98
USP12O75317 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.16■□□□□ 0.98
USP12O75317 AC073111.5-205ENST00000641717 521 ntBASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms