Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 MKRN4P-201ENST00000444706 1521 ntBASIC19.92■□□□□ 0.78
CPNE3O75131 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
CPNE3O75131 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.91■□□□□ 0.78
CPNE3O75131 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE3O75131 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE3O75131 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.91■□□□□ 0.78
CPNE3O75131 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE3O75131 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.91■□□□□ 0.78
CPNE3O75131 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE3O75131 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE3O75131 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CPNE3O75131 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE3O75131 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE3O75131 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
CPNE3O75131 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE3O75131 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
CPNE3O75131 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.91■□□□□ 0.78
CPNE3O75131 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
CPNE3O75131 AC243732.1-201ENST00000612648 864 ntBASIC19.91■□□□□ 0.78
CPNE3O75131 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.91■□□□□ 0.78
CPNE3O75131 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CPNE3O75131 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE3O75131 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE3O75131 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPNE3O75131 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPNE3O75131 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CPNE3O75131 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPNE3O75131 RNF165-205ENST00000588679 2904 ntBASIC19.9■□□□□ 0.78
CPNE3O75131 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPNE3O75131 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPNE3O75131 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CPNE3O75131 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.9■□□□□ 0.78
CPNE3O75131 AC073210.2-201ENST00000430369 194 ntBASIC19.9■□□□□ 0.78
CPNE3O75131 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CPNE3O75131 KRT18P6-201ENST00000555540 1265 ntBASIC19.9■□□□□ 0.78
CPNE3O75131 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.9■□□□□ 0.78
CPNE3O75131 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.9■□□□□ 0.78
CPNE3O75131 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
CPNE3O75131 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.9■□□□□ 0.78
CPNE3O75131 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPNE3O75131 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPNE3O75131 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CPNE3O75131 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPNE3O75131 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
CPNE3O75131 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
CPNE3O75131 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE3O75131 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE3O75131 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE3O75131 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE3O75131 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE3O75131 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.89■□□□□ 0.77
CPNE3O75131 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.89■□□□□ 0.77
CPNE3O75131 AL162412.1-201ENST00000567129 965 ntBASIC19.89■□□□□ 0.77
CPNE3O75131 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE3O75131 MIR4758-201ENST00000577688 71 ntBASIC19.89■□□□□ 0.77
CPNE3O75131 AL591742.1-201ENST00000604433 565 ntBASIC19.89■□□□□ 0.77
CPNE3O75131 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE3O75131 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE3O75131 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPNE3O75131 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.88■□□□□ 0.77
CPNE3O75131 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPNE3O75131 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPNE3O75131 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.88■□□□□ 0.77
CPNE3O75131 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.88■□□□□ 0.77
CPNE3O75131 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPNE3O75131 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CPNE3O75131 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPNE3O75131 ABHD17AP1-201ENST00000358206 933 ntBASIC19.88■□□□□ 0.77
CPNE3O75131 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPNE3O75131 AL512625.2-201ENST00000417533 625 ntBASIC19.88■□□□□ 0.77
CPNE3O75131 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.88■□□□□ 0.77
CPNE3O75131 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.88■□□□□ 0.77
CPNE3O75131 AC016405.3-201ENST00000607710 860 ntBASIC19.88■□□□□ 0.77
CPNE3O75131 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.88■□□□□ 0.77
CPNE3O75131 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPNE3O75131 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
CPNE3O75131 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CPNE3O75131 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CPNE3O75131 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.88■□□□□ 0.77
CPNE3O75131 ECEL1P1-201ENST00000373592 1742 ntBASIC19.88■□□□□ 0.77
CPNE3O75131 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CPNE3O75131 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CPNE3O75131 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE3O75131 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.87■□□□□ 0.77
CPNE3O75131 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CPNE3O75131 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE3O75131 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CPNE3O75131 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
CPNE3O75131 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE3O75131 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE3O75131 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CPNE3O75131 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE3O75131 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.87■□□□□ 0.77
CPNE3O75131 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.87■□□□□ 0.77
CPNE3O75131 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE3O75131 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.87■□□□□ 0.77
CPNE3O75131 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPNE3O75131 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.87■□□□□ 0.77
CPNE3O75131 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.87■□□□□ 0.77
CPNE3O75131 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms