Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CUBNO60494 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.76■□□□□ 0.27
CUBNO60494 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CUBNO60494 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CUBNO60494 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
CUBNO60494 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CUBNO60494 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CUBNO60494 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CUBNO60494 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CUBNO60494 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.76■□□□□ 0.27
CUBNO60494 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CUBNO60494 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.76■□□□□ 0.27
CUBNO60494 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.76■□□□□ 0.27
CUBNO60494 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.76■□□□□ 0.27
CUBNO60494 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CUBNO60494 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CUBNO60494 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CUBNO60494 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.76■□□□□ 0.27
CUBNO60494 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.76■□□□□ 0.27
CUBNO60494 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC16.76■□□□□ 0.27
CUBNO60494 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CUBNO60494 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CUBNO60494 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CUBNO60494 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CUBNO60494 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.75■□□□□ 0.27
CUBNO60494 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CUBNO60494 AC124016.1-201ENST00000609552 612 ntBASIC16.75■□□□□ 0.27
CUBNO60494 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CUBNO60494 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC16.75■□□□□ 0.27
CUBNO60494 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.75■□□□□ 0.27
CUBNO60494 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.75■□□□□ 0.27
CUBNO60494 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CUBNO60494 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.75■□□□□ 0.27
CUBNO60494 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CUBNO60494 MTDHP1-201ENST00000605323 784 ntBASIC16.75■□□□□ 0.27
CUBNO60494 MIR6786-201ENST00000616843 113 ntBASIC16.75■□□□□ 0.27
CUBNO60494 AC100791.3-201ENST00000617619 330 ntBASIC16.75■□□□□ 0.27
CUBNO60494 AC092865.7-201ENST00000641832 219 ntBASIC16.75■□□□□ 0.27
CUBNO60494 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CUBNO60494 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CUBNO60494 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.75■□□□□ 0.27
CUBNO60494 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CUBNO60494 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CUBNO60494 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CUBNO60494 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CUBNO60494 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CUBNO60494 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CUBNO60494 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CUBNO60494 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.74■□□□□ 0.27
CUBNO60494 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.74■□□□□ 0.27
CUBNO60494 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.74■□□□□ 0.27
CUBNO60494 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CUBNO60494 NFE2L3P1-201ENST00000588207 1959 ntBASIC16.74■□□□□ 0.27
CUBNO60494 C11orf96-202ENST00000528572 1834 ntBASIC16.74■□□□□ 0.27
CUBNO60494 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CUBNO60494 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC16.74■□□□□ 0.27
CUBNO60494 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CUBNO60494 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.74■□□□□ 0.27
CUBNO60494 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
CUBNO60494 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CUBNO60494 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.74■□□□□ 0.27
CUBNO60494 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.74■□□□□ 0.27
CUBNO60494 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.74■□□□□ 0.27
CUBNO60494 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.74■□□□□ 0.27
CUBNO60494 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CUBNO60494 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC16.74■□□□□ 0.27
CUBNO60494 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CUBNO60494 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CUBNO60494 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.73■□□□□ 0.27
CUBNO60494 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CUBNO60494 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CUBNO60494 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CUBNO60494 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CUBNO60494 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CUBNO60494 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC16.73■□□□□ 0.27
CUBNO60494 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CUBNO60494 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC16.73■□□□□ 0.27
CUBNO60494 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CUBNO60494 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CUBNO60494 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CUBNO60494 ARMC10P1-201ENST00000313754 855 ntBASIC16.73■□□□□ 0.27
CUBNO60494 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
CUBNO60494 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CUBNO60494 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CUBNO60494 AC079089.2-201ENST00000531211 1277 ntBASIC16.73■□□□□ 0.27
CUBNO60494 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.73■□□□□ 0.27
CUBNO60494 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CUBNO60494 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.73■□□□□ 0.27
CUBNO60494 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC16.73■□□□□ 0.27
CUBNO60494 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CUBNO60494 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CUBNO60494 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CUBNO60494 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.72■□□□□ 0.27
CUBNO60494 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CUBNO60494 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CUBNO60494 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CUBNO60494 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.72■□□□□ 0.27
CUBNO60494 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.72■□□□□ 0.27
CUBNO60494 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CUBNO60494 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms