Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.16■□□□□ 0.82
PEX1O43933 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PEX1O43933 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PEX1O43933 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.16■□□□□ 0.82
PEX1O43933 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.16■□□□□ 0.82
PEX1O43933 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PEX1O43933 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.16■□□□□ 0.82
PEX1O43933 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.16■□□□□ 0.82
PEX1O43933 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
PEX1O43933 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.16■□□□□ 0.82
PEX1O43933 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PEX1O43933 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.16■□□□□ 0.82
PEX1O43933 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
PEX1O43933 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PEX1O43933 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
PEX1O43933 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PEX1O43933 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PEX1O43933 AC092666.2-201ENST00000613287 246 ntBASIC20.15■□□□□ 0.82
PEX1O43933 AL358852.1-201ENST00000623174 1268 ntBASIC20.15■□□□□ 0.82
PEX1O43933 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PEX1O43933 AC004687.1-201ENST00000579003 1625 ntBASIC20.15■□□□□ 0.82
PEX1O43933 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PEX1O43933 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PEX1O43933 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.15■□□□□ 0.82
PEX1O43933 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
PEX1O43933 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PEX1O43933 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.15■□□□□ 0.82
PEX1O43933 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PEX1O43933 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PEX1O43933 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PEX1O43933 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PEX1O43933 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PEX1O43933 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
PEX1O43933 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PEX1O43933 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PEX1O43933 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
PEX1O43933 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PEX1O43933 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
PEX1O43933 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.14■□□□□ 0.81
PEX1O43933 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.14■□□□□ 0.81
PEX1O43933 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
PEX1O43933 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PEX1O43933 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PEX1O43933 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.14■□□□□ 0.81
PEX1O43933 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.14■□□□□ 0.81
PEX1O43933 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PEX1O43933 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PEX1O43933 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
PEX1O43933 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PEX1O43933 AP005212.1-201ENST00000581547 1997 ntBASIC20.14■□□□□ 0.81
PEX1O43933 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PEX1O43933 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PEX1O43933 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PEX1O43933 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.13■□□□□ 0.81
PEX1O43933 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.13■□□□□ 0.81
PEX1O43933 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.13■□□□□ 0.81
PEX1O43933 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PEX1O43933 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PEX1O43933 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PEX1O43933 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.13■□□□□ 0.81
PEX1O43933 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PEX1O43933 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
PEX1O43933 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PEX1O43933 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PEX1O43933 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
PEX1O43933 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PEX1O43933 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PEX1O43933 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PEX1O43933 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
PEX1O43933 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PEX1O43933 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.12■□□□□ 0.81
PEX1O43933 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
PEX1O43933 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PEX1O43933 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PEX1O43933 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.12■□□□□ 0.81
PEX1O43933 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PEX1O43933 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PEX1O43933 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.12■□□□□ 0.81
PEX1O43933 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.12■□□□□ 0.81
PEX1O43933 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.12■□□□□ 0.81
PEX1O43933 AC104564.3-201ENST00000582367 638 ntBASIC20.12■□□□□ 0.81
PEX1O43933 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.12■□□□□ 0.81
PEX1O43933 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PEX1O43933 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.12■□□□□ 0.81
PEX1O43933 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
PEX1O43933 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PEX1O43933 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PEX1O43933 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PEX1O43933 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PEX1O43933 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PEX1O43933 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PEX1O43933 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PEX1O43933 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PEX1O43933 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PEX1O43933 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PEX1O43933 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
PEX1O43933 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.11■□□□□ 0.81
PEX1O43933 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PEX1O43933 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PEX1O43933 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms