Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SMAD6O43541 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
SMAD6O43541 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMAD6O43541 AL355802.2-201ENST00000402069 882 ntBASIC21.1■□□□□ 0.97
SMAD6O43541 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.1■□□□□ 0.97
SMAD6O43541 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SMAD6O43541 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMAD6O43541 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMAD6O43541 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.1■□□□□ 0.97
SMAD6O43541 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.1■□□□□ 0.97
SMAD6O43541 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SMAD6O43541 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
SMAD6O43541 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.09■□□□□ 0.97
SMAD6O43541 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMAD6O43541 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.09■□□□□ 0.97
SMAD6O43541 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.09■□□□□ 0.97
SMAD6O43541 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SMAD6O43541 AL162412.1-201ENST00000567129 965 ntBASIC21.09■□□□□ 0.97
SMAD6O43541 OR10C1-204ENST00000622521 1039 ntBASIC21.09■□□□□ 0.97
SMAD6O43541 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SMAD6O43541 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMAD6O43541 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SMAD6O43541 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
SMAD6O43541 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMAD6O43541 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.08■□□□□ 0.97
SMAD6O43541 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SMAD6O43541 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.97
SMAD6O43541 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.08■□□□□ 0.97
SMAD6O43541 AL138781.1-201ENST00000566567 1274 ntBASIC21.08■□□□□ 0.97
SMAD6O43541 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.08■□□□□ 0.97
SMAD6O43541 AC069236.1-201ENST00000604339 616 ntBASIC21.08■□□□□ 0.97
SMAD6O43541 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.08■□□□□ 0.97
SMAD6O43541 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.08■□□□□ 0.97
SMAD6O43541 AC008694.1-202ENST00000636953 945 ntBASIC21.08■□□□□ 0.97
SMAD6O43541 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SMAD6O43541 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.08■□□□□ 0.96
SMAD6O43541 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.08■□□□□ 0.96
SMAD6O43541 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SMAD6O43541 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.08■□□□□ 0.96
SMAD6O43541 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SMAD6O43541 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SMAD6O43541 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMAD6O43541 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.07■□□□□ 0.96
SMAD6O43541 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMAD6O43541 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMAD6O43541 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMAD6O43541 RARRES2P4-201ENST00000514074 484 ntBASIC21.07■□□□□ 0.96
SMAD6O43541 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SMAD6O43541 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMAD6O43541 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
SMAD6O43541 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
SMAD6O43541 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMAD6O43541 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.06■□□□□ 0.96
SMAD6O43541 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMAD6O43541 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMAD6O43541 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SMAD6O43541 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMAD6O43541 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SMAD6O43541 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SMAD6O43541 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMAD6O43541 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.06■□□□□ 0.96
SMAD6O43541 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.06■□□□□ 0.96
SMAD6O43541 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMAD6O43541 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMAD6O43541 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
SMAD6O43541 SLC29A4P1-201ENST00000398760 971 ntBASIC21.05■□□□□ 0.96
SMAD6O43541 AL512625.2-201ENST00000417533 625 ntBASIC21.05■□□□□ 0.96
SMAD6O43541 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.05■□□□□ 0.96
SMAD6O43541 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.05■□□□□ 0.96
SMAD6O43541 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.05■□□□□ 0.96
SMAD6O43541 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.05■□□□□ 0.96
SMAD6O43541 AC142086.2-201ENST00000569753 217 ntBASIC21.05■□□□□ 0.96
SMAD6O43541 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.05■□□□□ 0.96
SMAD6O43541 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SMAD6O43541 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SMAD6O43541 AL024507.2-201ENST00000606070 2574 ntBASIC21.05■□□□□ 0.96
SMAD6O43541 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.05■□□□□ 0.96
SMAD6O43541 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMAD6O43541 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SMAD6O43541 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMAD6O43541 MKRN4P-201ENST00000444706 1521 ntBASIC21.04■□□□□ 0.96
SMAD6O43541 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
SMAD6O43541 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.04■□□□□ 0.96
SMAD6O43541 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
SMAD6O43541 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMAD6O43541 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.04■□□□□ 0.96
SMAD6O43541 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.04■□□□□ 0.96
SMAD6O43541 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.04■□□□□ 0.96
SMAD6O43541 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.04■□□□□ 0.96
SMAD6O43541 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMAD6O43541 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMAD6O43541 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SMAD6O43541 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SMAD6O43541 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SMAD6O43541 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMAD6O43541 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMAD6O43541 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMAD6O43541 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMAD6O43541 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.03■□□□□ 0.96
SMAD6O43541 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms