Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.66■□□□□ 0.9
PHGDHO43175 TPRG1LP1-201ENST00000598702 760 ntBASIC20.66■□□□□ 0.9
PHGDHO43175 AL139246.5-201ENST00000606645 996 ntBASIC20.66■□□□□ 0.9
PHGDHO43175 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.66■□□□□ 0.9
PHGDHO43175 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.66■□□□□ 0.9
PHGDHO43175 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.66■□□□□ 0.9
PHGDHO43175 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PHGDHO43175 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHGDHO43175 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHGDHO43175 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PHGDHO43175 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.66■□□□□ 0.9
PHGDHO43175 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHGDHO43175 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHGDHO43175 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.65■□□□□ 0.9
PHGDHO43175 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PHGDHO43175 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PHGDHO43175 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.65■□□□□ 0.9
PHGDHO43175 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHGDHO43175 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.65■□□□□ 0.9
PHGDHO43175 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHGDHO43175 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.65■□□□□ 0.9
PHGDHO43175 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.65■□□□□ 0.9
PHGDHO43175 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.65■□□□□ 0.9
PHGDHO43175 EEF1DP3-203ENST00000566025 782 ntBASIC20.65■□□□□ 0.9
PHGDHO43175 MIR6084-201ENST00000622012 110 ntBASIC20.65■□□□□ 0.9
PHGDHO43175 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHGDHO43175 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHGDHO43175 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHGDHO43175 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHGDHO43175 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
PHGDHO43175 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PHGDHO43175 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
PHGDHO43175 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
PHGDHO43175 AC061975.6-201ENST00000579045 1553 ntBASIC20.64■□□□□ 0.9
PHGDHO43175 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.64■□□□□ 0.9
PHGDHO43175 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.64■□□□□ 0.9
PHGDHO43175 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PHGDHO43175 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.64■□□□□ 0.89
PHGDHO43175 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PHGDHO43175 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PHGDHO43175 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PHGDHO43175 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PHGDHO43175 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PHGDHO43175 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PHGDHO43175 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PHGDHO43175 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHGDHO43175 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHGDHO43175 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHGDHO43175 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHGDHO43175 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
PHGDHO43175 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHGDHO43175 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHGDHO43175 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.63■□□□□ 0.89
PHGDHO43175 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHGDHO43175 AC142381.2-201ENST00000566120 298 ntBASIC20.63■□□□□ 0.89
PHGDHO43175 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.63■□□□□ 0.89
PHGDHO43175 AC053503.5-201ENST00000601508 636 ntBASIC20.63■□□□□ 0.89
PHGDHO43175 AL354811.1-201ENST00000610286 706 ntBASIC20.63■□□□□ 0.89
PHGDHO43175 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHGDHO43175 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PHGDHO43175 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHGDHO43175 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PHGDHO43175 AP005212.1-201ENST00000581547 1997 ntBASIC20.63■□□□□ 0.89
PHGDHO43175 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PHGDHO43175 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PHGDHO43175 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PHGDHO43175 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PHGDHO43175 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PHGDHO43175 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PHGDHO43175 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PHGDHO43175 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PHGDHO43175 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
PHGDHO43175 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
PHGDHO43175 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PHGDHO43175 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PHGDHO43175 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PHGDHO43175 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PHGDHO43175 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PHGDHO43175 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.62■□□□□ 0.89
PHGDHO43175 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.62■□□□□ 0.89
PHGDHO43175 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.62■□□□□ 0.89
PHGDHO43175 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.62■□□□□ 0.89
PHGDHO43175 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.62■□□□□ 0.89
PHGDHO43175 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
PHGDHO43175 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PHGDHO43175 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PHGDHO43175 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PHGDHO43175 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
PHGDHO43175 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PHGDHO43175 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PHGDHO43175 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PHGDHO43175 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
PHGDHO43175 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PHGDHO43175 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PHGDHO43175 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PHGDHO43175 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PHGDHO43175 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
PHGDHO43175 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PHGDHO43175 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.61■□□□□ 0.89
PHGDHO43175 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms