Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
ABCC4O15439 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
ABCC4O15439 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
ABCC4O15439 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
ABCC4O15439 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
ABCC4O15439 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
ABCC4O15439 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
ABCC4O15439 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC26.58■■□□□ 1.85
ABCC4O15439 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.58■■□□□ 1.85
ABCC4O15439 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC26.58■■□□□ 1.85
ABCC4O15439 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC26.58■■□□□ 1.85
ABCC4O15439 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
ABCC4O15439 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
ABCC4O15439 RGMA-211ENST00000557420 989 ntTSL 3 BASIC26.58■■□□□ 1.85
ABCC4O15439 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC26.58■■□□□ 1.84
ABCC4O15439 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
ABCC4O15439 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC26.57■■□□□ 1.84
ABCC4O15439 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
ABCC4O15439 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC26.57■■□□□ 1.84
ABCC4O15439 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
ABCC4O15439 AC005229.4-201ENST00000610085 2198 ntBASIC26.57■■□□□ 1.84
ABCC4O15439 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC26.57■■□□□ 1.84
ABCC4O15439 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
ABCC4O15439 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC26.57■■□□□ 1.84
ABCC4O15439 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC26.57■■□□□ 1.84
ABCC4O15439 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC26.57■■□□□ 1.84
ABCC4O15439 AC008175.2-201ENST00000612840 297 ntBASIC26.57■■□□□ 1.84
ABCC4O15439 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC26.57■■□□□ 1.84
ABCC4O15439 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC26.57■■□□□ 1.84
ABCC4O15439 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
ABCC4O15439 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
ABCC4O15439 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
ABCC4O15439 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
ABCC4O15439 KRT16P2-201ENST00000414673 1423 ntBASIC26.56■■□□□ 1.84
ABCC4O15439 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
ABCC4O15439 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC26.56■■□□□ 1.84
ABCC4O15439 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC26.56■■□□□ 1.84
ABCC4O15439 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC26.56■■□□□ 1.84
ABCC4O15439 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC26.56■■□□□ 1.84
ABCC4O15439 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
ABCC4O15439 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
ABCC4O15439 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
ABCC4O15439 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ABCC4O15439 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
ABCC4O15439 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ABCC4O15439 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC26.55■■□□□ 1.84
ABCC4O15439 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
ABCC4O15439 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
ABCC4O15439 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
ABCC4O15439 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
ABCC4O15439 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
ABCC4O15439 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC26.55■■□□□ 1.84
ABCC4O15439 AC073210.2-201ENST00000430369 194 ntBASIC26.55■■□□□ 1.84
ABCC4O15439 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC26.55■■□□□ 1.84
ABCC4O15439 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ABCC4O15439 AC066615.1-201ENST00000640911 628 ntBASIC26.55■■□□□ 1.84
ABCC4O15439 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
ABCC4O15439 AL137060.1-201ENST00000618151 2648 ntBASIC26.55■■□□□ 1.84
ABCC4O15439 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ABCC4O15439 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ABCC4O15439 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC26.54■■□□□ 1.84
ABCC4O15439 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC26.54■■□□□ 1.84
ABCC4O15439 AL049796.1-201ENST00000565336 1766 ntBASIC26.54■■□□□ 1.84
ABCC4O15439 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ABCC4O15439 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC26.54■■□□□ 1.84
ABCC4O15439 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC26.54■■□□□ 1.84
ABCC4O15439 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
ABCC4O15439 AC013268.1-206ENST00000638368 961 ntBASIC26.54■■□□□ 1.84
ABCC4O15439 AC112229.1-201ENST00000639295 961 ntBASIC26.54■■□□□ 1.84
ABCC4O15439 AC133041.1-202ENST00000642053 222 ntBASIC26.54■■□□□ 1.84
ABCC4O15439 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC26.54■■□□□ 1.84
ABCC4O15439 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
ABCC4O15439 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
ABCC4O15439 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ABCC4O15439 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC26.53■■□□□ 1.84
ABCC4O15439 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
ABCC4O15439 CYP2T1P-201ENST00000432607 1285 ntBASIC26.53■■□□□ 1.84
ABCC4O15439 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC26.53■■□□□ 1.84
ABCC4O15439 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
ABCC4O15439 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
ABCC4O15439 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC26.53■■□□□ 1.84
ABCC4O15439 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
ABCC4O15439 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
ABCC4O15439 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
ABCC4O15439 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC26.52■■□□□ 1.84
ABCC4O15439 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
ABCC4O15439 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
ABCC4O15439 TERF1P5-201ENST00000477545 1207 ntBASIC26.52■■□□□ 1.84
ABCC4O15439 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
ABCC4O15439 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC26.52■■□□□ 1.84
ABCC4O15439 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
ABCC4O15439 SLC7A5P1-201ENST00000568957 537 ntBASIC26.52■■□□□ 1.84
ABCC4O15439 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC26.52■■□□□ 1.84
ABCC4O15439 AC068338.2-201ENST00000563278 1430 ntBASIC26.52■■□□□ 1.84
ABCC4O15439 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
ABCC4O15439 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
ABCC4O15439 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.84
ABCC4O15439 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC26.51■■□□□ 1.84
ABCC4O15439 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC26.51■■□□□ 1.83
ABCC4O15439 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms