Protein–RNA interactions for Protein: O14545

TRAFD1, TRAF-type zinc finger domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1O14545 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRAFD1O14545 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRAFD1O14545 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.29■■□□□ 1
TRAFD1O14545 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRAFD1O14545 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TRAFD1O14545 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRAFD1O14545 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRAFD1O14545 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRAFD1O14545 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TRAFD1O14545 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRAFD1O14545 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRAFD1O14545 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.28■■□□□ 1
TRAFD1O14545 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRAFD1O14545 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRAFD1O14545 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRAFD1O14545 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRAFD1O14545 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRAFD1O14545 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRAFD1O14545 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
TRAFD1O14545 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
TRAFD1O14545 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.27■■□□□ 1
TRAFD1O14545 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
TRAFD1O14545 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
TRAFD1O14545 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
TRAFD1O14545 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRAFD1O14545 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.27■■□□□ 1
TRAFD1O14545 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRAFD1O14545 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRAFD1O14545 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRAFD1O14545 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TRAFD1O14545 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.27■■□□□ 1
TRAFD1O14545 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.27■■□□□ 1
TRAFD1O14545 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRAFD1O14545 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.26■□□□□ 0.99
TRAFD1O14545 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRAFD1O14545 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRAFD1O14545 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRAFD1O14545 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.26■□□□□ 0.99
TRAFD1O14545 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.26■□□□□ 0.99
TRAFD1O14545 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRAFD1O14545 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
TRAFD1O14545 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRAFD1O14545 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.26■□□□□ 0.99
TRAFD1O14545 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRAFD1O14545 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRAFD1O14545 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.26■□□□□ 0.99
TRAFD1O14545 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.26■□□□□ 0.99
TRAFD1O14545 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.26■□□□□ 0.99
TRAFD1O14545 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.26■□□□□ 0.99
TRAFD1O14545 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRAFD1O14545 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRAFD1O14545 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRAFD1O14545 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRAFD1O14545 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.26■□□□□ 0.99
TRAFD1O14545 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRAFD1O14545 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
TRAFD1O14545 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRAFD1O14545 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRAFD1O14545 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.25■□□□□ 0.99
TRAFD1O14545 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.25■□□□□ 0.99
TRAFD1O14545 KRT18P20-201ENST00000548986 1279 ntBASIC21.25■□□□□ 0.99
TRAFD1O14545 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRAFD1O14545 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.25■□□□□ 0.99
TRAFD1O14545 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRAFD1O14545 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.25■□□□□ 0.99
TRAFD1O14545 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRAFD1O14545 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
TRAFD1O14545 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRAFD1O14545 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRAFD1O14545 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.24■□□□□ 0.99
TRAFD1O14545 AL137784.2-201ENST00000607332 1000 ntBASIC21.24■□□□□ 0.99
TRAFD1O14545 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
TRAFD1O14545 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRAFD1O14545 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.24■□□□□ 0.99
TRAFD1O14545 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
TRAFD1O14545 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRAFD1O14545 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRAFD1O14545 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.24■□□□□ 0.99
TRAFD1O14545 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
TRAFD1O14545 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRAFD1O14545 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.23■□□□□ 0.99
TRAFD1O14545 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.23■□□□□ 0.99
TRAFD1O14545 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.23■□□□□ 0.99
TRAFD1O14545 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRAFD1O14545 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRAFD1O14545 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRAFD1O14545 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
TRAFD1O14545 UBE2DNL-204ENST00000602536 740 ntBASIC21.23■□□□□ 0.99
TRAFD1O14545 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.23■□□□□ 0.99
TRAFD1O14545 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRAFD1O14545 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRAFD1O14545 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRAFD1O14545 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.23■□□□□ 0.99
TRAFD1O14545 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
TRAFD1O14545 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRAFD1O14545 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRAFD1O14545 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRAFD1O14545 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRAFD1O14545 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRAFD1O14545 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms