Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.6■□□□□ 0.73
CLIC1O00299 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.6■□□□□ 0.73
CLIC1O00299 PBX2P1-201ENST00000493219 1291 ntBASIC19.6■□□□□ 0.73
CLIC1O00299 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.6■□□□□ 0.73
CLIC1O00299 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.6■□□□□ 0.73
CLIC1O00299 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
CLIC1O00299 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
CLIC1O00299 AC007225.1-201ENST00000566331 1836 ntBASIC19.6■□□□□ 0.73
CLIC1O00299 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.6■□□□□ 0.73
CLIC1O00299 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLIC1O00299 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLIC1O00299 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CLIC1O00299 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLIC1O00299 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CLIC1O00299 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.59■□□□□ 0.73
CLIC1O00299 AC096631.2-201ENST00000436136 790 ntBASIC19.59■□□□□ 0.73
CLIC1O00299 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
CLIC1O00299 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.59■□□□□ 0.73
CLIC1O00299 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.59■□□□□ 0.73
CLIC1O00299 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLIC1O00299 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLIC1O00299 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLIC1O00299 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
CLIC1O00299 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CLIC1O00299 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.58■□□□□ 0.73
CLIC1O00299 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLIC1O00299 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CLIC1O00299 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.58■□□□□ 0.73
CLIC1O00299 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLIC1O00299 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLIC1O00299 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.58■□□□□ 0.72
CLIC1O00299 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLIC1O00299 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLIC1O00299 MIR572-201ENST00000384983 95 ntBASIC19.58■□□□□ 0.72
CLIC1O00299 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.58■□□□□ 0.72
CLIC1O00299 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.58■□□□□ 0.72
CLIC1O00299 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLIC1O00299 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLIC1O00299 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.58■□□□□ 0.72
CLIC1O00299 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.58■□□□□ 0.72
CLIC1O00299 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLIC1O00299 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CLIC1O00299 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLIC1O00299 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLIC1O00299 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLIC1O00299 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
CLIC1O00299 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLIC1O00299 AC027702.1-201ENST00000563810 1770 ntBASIC19.57■□□□□ 0.72
CLIC1O00299 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLIC1O00299 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.57■□□□□ 0.72
CLIC1O00299 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLIC1O00299 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLIC1O00299 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLIC1O00299 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLIC1O00299 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLIC1O00299 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
CLIC1O00299 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLIC1O00299 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLIC1O00299 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.57■□□□□ 0.72
CLIC1O00299 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.57■□□□□ 0.72
CLIC1O00299 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.57■□□□□ 0.72
CLIC1O00299 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.57■□□□□ 0.72
CLIC1O00299 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.57■□□□□ 0.72
CLIC1O00299 AC106739.1-201ENST00000617035 715 ntBASIC19.57■□□□□ 0.72
CLIC1O00299 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.57■□□□□ 0.72
CLIC1O00299 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLIC1O00299 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLIC1O00299 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLIC1O00299 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLIC1O00299 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CLIC1O00299 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLIC1O00299 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.57■□□□□ 0.72
CLIC1O00299 AC008406.3-201ENST00000620001 1374 ntBASIC19.57■□□□□ 0.72
CLIC1O00299 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.56■□□□□ 0.72
CLIC1O00299 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
CLIC1O00299 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLIC1O00299 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLIC1O00299 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLIC1O00299 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLIC1O00299 EDA-201ENST00000338901 1233 ntBASIC19.56■□□□□ 0.72
CLIC1O00299 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLIC1O00299 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CLIC1O00299 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.56■□□□□ 0.72
CLIC1O00299 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.56■□□□□ 0.72
CLIC1O00299 AP001330.3-201ENST00000520123 633 ntBASIC19.56■□□□□ 0.72
CLIC1O00299 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLIC1O00299 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLIC1O00299 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.56■□□□□ 0.72
CLIC1O00299 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLIC1O00299 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLIC1O00299 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLIC1O00299 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CLIC1O00299 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLIC1O00299 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.55■□□□□ 0.72
CLIC1O00299 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CLIC1O00299 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CLIC1O00299 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CLIC1O00299 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLIC1O00299 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLIC1O00299 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms