Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.29■□□□□ 0.84
TAF4O00268 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TAF4O00268 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TAF4O00268 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TAF4O00268 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TAF4O00268 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TAF4O00268 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TAF4O00268 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
TAF4O00268 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TAF4O00268 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TAF4O00268 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TAF4O00268 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.28■□□□□ 0.84
TAF4O00268 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TAF4O00268 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TAF4O00268 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TAF4O00268 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
TAF4O00268 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.28■□□□□ 0.84
TAF4O00268 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.28■□□□□ 0.84
TAF4O00268 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.28■□□□□ 0.84
TAF4O00268 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.28■□□□□ 0.84
TAF4O00268 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TAF4O00268 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TAF4O00268 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
TAF4O00268 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TAF4O00268 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TAF4O00268 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TAF4O00268 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TAF4O00268 ANOS2P-203ENST00000472227 1816 ntBASIC20.27■□□□□ 0.84
TAF4O00268 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.27■□□□□ 0.84
TAF4O00268 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
TAF4O00268 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TAF4O00268 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.27■□□□□ 0.84
TAF4O00268 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TAF4O00268 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TAF4O00268 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TAF4O00268 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TAF4O00268 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TAF4O00268 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TAF4O00268 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TAF4O00268 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.27■□□□□ 0.84
TAF4O00268 AC007322.4-201ENST00000509611 723 ntBASIC20.27■□□□□ 0.84
TAF4O00268 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.27■□□□□ 0.84
TAF4O00268 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.27■□□□□ 0.84
TAF4O00268 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TAF4O00268 Z99916.2-201ENST00000604037 246 ntBASIC20.27■□□□□ 0.84
TAF4O00268 AC008694.1-202ENST00000636953 945 ntBASIC20.27■□□□□ 0.84
TAF4O00268 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TAF4O00268 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TAF4O00268 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.27■□□□□ 0.83
TAF4O00268 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
TAF4O00268 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.26■□□□□ 0.83
TAF4O00268 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TAF4O00268 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TAF4O00268 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TAF4O00268 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.26■□□□□ 0.83
TAF4O00268 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.26■□□□□ 0.83
TAF4O00268 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TAF4O00268 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TAF4O00268 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
TAF4O00268 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.26■□□□□ 0.83
TAF4O00268 AP003097.1-201ENST00000530657 1135 ntBASIC20.26■□□□□ 0.83
TAF4O00268 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.26■□□□□ 0.83
TAF4O00268 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.26■□□□□ 0.83
TAF4O00268 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TAF4O00268 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TAF4O00268 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TAF4O00268 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TAF4O00268 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TAF4O00268 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TAF4O00268 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.26■□□□□ 0.83
TAF4O00268 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TAF4O00268 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TAF4O00268 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TAF4O00268 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TAF4O00268 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
TAF4O00268 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
TAF4O00268 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TAF4O00268 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TAF4O00268 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TAF4O00268 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TAF4O00268 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TAF4O00268 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TAF4O00268 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.25■□□□□ 0.83
TAF4O00268 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TAF4O00268 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.25■□□□□ 0.83
TAF4O00268 AC138907.5-202ENST00000569484 235 ntBASIC20.25■□□□□ 0.83
TAF4O00268 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.25■□□□□ 0.83
TAF4O00268 AC069236.1-201ENST00000604339 616 ntBASIC20.25■□□□□ 0.83
TAF4O00268 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.25■□□□□ 0.83
TAF4O00268 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.25■□□□□ 0.83
TAF4O00268 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TAF4O00268 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TAF4O00268 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TAF4O00268 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TAF4O00268 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TAF4O00268 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TAF4O00268 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TAF4O00268 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.24■□□□□ 0.83
TAF4O00268 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TAF4O00268 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms