Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.94■□□□□ 0.62
NPIPA3F8WFD2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.94■□□□□ 0.62
NPIPA3F8WFD2 AC008694.1-202ENST00000636953 945 ntBASIC18.94■□□□□ 0.62
NPIPA3F8WFD2 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPIPA3F8WFD2 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NPIPA3F8WFD2 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.94■□□□□ 0.62
NPIPA3F8WFD2 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NPIPA3F8WFD2 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.94■□□□□ 0.62
NPIPA3F8WFD2 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPIPA3F8WFD2 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPIPA3F8WFD2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPIPA3F8WFD2 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.93■□□□□ 0.62
NPIPA3F8WFD2 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NPIPA3F8WFD2 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NPIPA3F8WFD2 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NPIPA3F8WFD2 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NPIPA3F8WFD2 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NPIPA3F8WFD2 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.93■□□□□ 0.62
NPIPA3F8WFD2 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
NPIPA3F8WFD2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.93■□□□□ 0.62
NPIPA3F8WFD2 AC007322.4-201ENST00000509611 723 ntBASIC18.93■□□□□ 0.62
NPIPA3F8WFD2 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.93■□□□□ 0.62
NPIPA3F8WFD2 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.93■□□□□ 0.62
NPIPA3F8WFD2 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.93■□□□□ 0.62
NPIPA3F8WFD2 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.93■□□□□ 0.62
NPIPA3F8WFD2 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NPIPA3F8WFD2 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.93■□□□□ 0.62
NPIPA3F8WFD2 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.93■□□□□ 0.62
NPIPA3F8WFD2 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.93■□□□□ 0.62
NPIPA3F8WFD2 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
NPIPA3F8WFD2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.93■□□□□ 0.62
NPIPA3F8WFD2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
NPIPA3F8WFD2 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NPIPA3F8WFD2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NPIPA3F8WFD2 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.93■□□□□ 0.62
NPIPA3F8WFD2 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
NPIPA3F8WFD2 AC061975.6-201ENST00000579045 1553 ntBASIC18.93■□□□□ 0.62
NPIPA3F8WFD2 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NPIPA3F8WFD2 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NPIPA3F8WFD2 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NPIPA3F8WFD2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPIPA3F8WFD2 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NPIPA3F8WFD2 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.92■□□□□ 0.62
NPIPA3F8WFD2 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPIPA3F8WFD2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.92■□□□□ 0.62
NPIPA3F8WFD2 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NPIPA3F8WFD2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPIPA3F8WFD2 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPIPA3F8WFD2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPIPA3F8WFD2 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.92■□□□□ 0.62
NPIPA3F8WFD2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NPIPA3F8WFD2 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
NPIPA3F8WFD2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.92■□□□□ 0.62
NPIPA3F8WFD2 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.92■□□□□ 0.62
NPIPA3F8WFD2 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPIPA3F8WFD2 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.92■□□□□ 0.62
NPIPA3F8WFD2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
NPIPA3F8WFD2 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.92■□□□□ 0.62
NPIPA3F8WFD2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.92■□□□□ 0.62
NPIPA3F8WFD2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NPIPA3F8WFD2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
NPIPA3F8WFD2 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPIPA3F8WFD2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.92■□□□□ 0.62
NPIPA3F8WFD2 KRT16P2-201ENST00000414673 1423 ntBASIC18.91■□□□□ 0.62
NPIPA3F8WFD2 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
NPIPA3F8WFD2 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NPIPA3F8WFD2 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
NPIPA3F8WFD2 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.91■□□□□ 0.62
NPIPA3F8WFD2 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NPIPA3F8WFD2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NPIPA3F8WFD2 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
NPIPA3F8WFD2 ABHD17AP1-201ENST00000358206 933 ntBASIC18.91■□□□□ 0.62
NPIPA3F8WFD2 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NPIPA3F8WFD2 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.91■□□□□ 0.62
NPIPA3F8WFD2 AC069152.1-201ENST00000438030 544 ntBASIC18.91■□□□□ 0.62
NPIPA3F8WFD2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NPIPA3F8WFD2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.91■□□□□ 0.62
NPIPA3F8WFD2 KRT18P6-201ENST00000555540 1265 ntBASIC18.91■□□□□ 0.62
NPIPA3F8WFD2 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.91■□□□□ 0.62
NPIPA3F8WFD2 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.91■□□□□ 0.62
NPIPA3F8WFD2 AC069236.1-201ENST00000604339 616 ntBASIC18.91■□□□□ 0.62
NPIPA3F8WFD2 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
NPIPA3F8WFD2 AC133041.1-202ENST00000642053 222 ntBASIC18.91■□□□□ 0.62
NPIPA3F8WFD2 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NPIPA3F8WFD2 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NPIPA3F8WFD2 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPIPA3F8WFD2 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.9■□□□□ 0.62
NPIPA3F8WFD2 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPIPA3F8WFD2 MKRN4P-201ENST00000444706 1521 ntBASIC18.9■□□□□ 0.62
NPIPA3F8WFD2 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPIPA3F8WFD2 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
NPIPA3F8WFD2 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPIPA3F8WFD2 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPIPA3F8WFD2 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.9■□□□□ 0.62
NPIPA3F8WFD2 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.9■□□□□ 0.62
NPIPA3F8WFD2 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.9■□□□□ 0.62
NPIPA3F8WFD2 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.9■□□□□ 0.62
NPIPA3F8WFD2 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
NPIPA3F8WFD2 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPIPA3F8WFD2 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms