Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.43■□□□□ 0.54
NPIPB4C9JG80 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
NPIPB4C9JG80 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
NPIPB4C9JG80 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
NPIPB4C9JG80 LINC01521-201ENST00000504184 1943 ntBASIC18.43■□□□□ 0.54
NPIPB4C9JG80 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NPIPB4C9JG80 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPIPB4C9JG80 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.42■□□□□ 0.54
NPIPB4C9JG80 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPIPB4C9JG80 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPIPB4C9JG80 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
NPIPB4C9JG80 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
NPIPB4C9JG80 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.42■□□□□ 0.54
NPIPB4C9JG80 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPIPB4C9JG80 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.42■□□□□ 0.54
NPIPB4C9JG80 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.42■□□□□ 0.54
NPIPB4C9JG80 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.42■□□□□ 0.54
NPIPB4C9JG80 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.42■□□□□ 0.54
NPIPB4C9JG80 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPIPB4C9JG80 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPIPB4C9JG80 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.42■□□□□ 0.54
NPIPB4C9JG80 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.42■□□□□ 0.54
NPIPB4C9JG80 MIR6821-201ENST00000617625 74 ntBASIC18.42■□□□□ 0.54
NPIPB4C9JG80 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.42■□□□□ 0.54
NPIPB4C9JG80 AC007225.1-201ENST00000566331 1836 ntBASIC18.42■□□□□ 0.54
NPIPB4C9JG80 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPIPB4C9JG80 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.42■□□□□ 0.54
NPIPB4C9JG80 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.42■□□□□ 0.54
NPIPB4C9JG80 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPIPB4C9JG80 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NPIPB4C9JG80 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NPIPB4C9JG80 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.41■□□□□ 0.54
NPIPB4C9JG80 FEM1AP1-201ENST00000431297 1995 ntBASIC18.41■□□□□ 0.54
NPIPB4C9JG80 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPIPB4C9JG80 AC034268.1-201ENST00000441047 882 ntBASIC18.41■□□□□ 0.54
NPIPB4C9JG80 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.41■□□□□ 0.54
NPIPB4C9JG80 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.41■□□□□ 0.54
NPIPB4C9JG80 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPIPB4C9JG80 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.41■□□□□ 0.54
NPIPB4C9JG80 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPIPB4C9JG80 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPIPB4C9JG80 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.41■□□□□ 0.54
NPIPB4C9JG80 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.41■□□□□ 0.54
NPIPB4C9JG80 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
NPIPB4C9JG80 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPIPB4C9JG80 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NPIPB4C9JG80 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.41■□□□□ 0.54
NPIPB4C9JG80 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.4■□□□□ 0.54
NPIPB4C9JG80 RBM17P2-201ENST00000616397 1405 ntBASIC18.4■□□□□ 0.54
NPIPB4C9JG80 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.4■□□□□ 0.54
NPIPB4C9JG80 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NPIPB4C9JG80 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.4■□□□□ 0.54
NPIPB4C9JG80 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPIPB4C9JG80 GABARAPL3-202ENST00000624044 1851 ntBASIC18.4■□□□□ 0.54
NPIPB4C9JG80 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPIPB4C9JG80 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NPIPB4C9JG80 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.4■□□□□ 0.54
NPIPB4C9JG80 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.4■□□□□ 0.54
NPIPB4C9JG80 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.4■□□□□ 0.54
NPIPB4C9JG80 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.4■□□□□ 0.54
NPIPB4C9JG80 KRT18P61-201ENST00000585825 1298 ntBASIC18.4■□□□□ 0.54
NPIPB4C9JG80 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.4■□□□□ 0.54
NPIPB4C9JG80 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
NPIPB4C9JG80 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
NPIPB4C9JG80 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPIPB4C9JG80 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPIPB4C9JG80 AC019069.1-201ENST00000610008 1333 ntBASIC18.4■□□□□ 0.54
NPIPB4C9JG80 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
NPIPB4C9JG80 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
NPIPB4C9JG80 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.4■□□□□ 0.54
NPIPB4C9JG80 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NPIPB4C9JG80 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.4■□□□□ 0.54
NPIPB4C9JG80 AC116050.2-201ENST00000612102 1779 ntBASIC18.4■□□□□ 0.54
NPIPB4C9JG80 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.4■□□□□ 0.54
NPIPB4C9JG80 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NPIPB4C9JG80 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
NPIPB4C9JG80 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
NPIPB4C9JG80 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
NPIPB4C9JG80 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
NPIPB4C9JG80 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NPIPB4C9JG80 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.39■□□□□ 0.53
NPIPB4C9JG80 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NPIPB4C9JG80 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPIPB4C9JG80 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
NPIPB4C9JG80 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.39■□□□□ 0.53
NPIPB4C9JG80 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.39■□□□□ 0.53
NPIPB4C9JG80 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.39■□□□□ 0.53
NPIPB4C9JG80 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NPIPB4C9JG80 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.39■□□□□ 0.53
NPIPB4C9JG80 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.39■□□□□ 0.53
NPIPB4C9JG80 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NPIPB4C9JG80 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.39■□□□□ 0.53
NPIPB4C9JG80 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NPIPB4C9JG80 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
NPIPB4C9JG80 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.39■□□□□ 0.53
NPIPB4C9JG80 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
NPIPB4C9JG80 AP005212.1-201ENST00000581547 1997 ntBASIC18.39■□□□□ 0.53
NPIPB4C9JG80 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NPIPB4C9JG80 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NPIPB4C9JG80 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms