Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CGB1A6NKQ9 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CGB1A6NKQ9 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CGB1A6NKQ9 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CGB1A6NKQ9 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.6■□□□□ 0.25
CGB1A6NKQ9 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CGB1A6NKQ9 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC16.6■□□□□ 0.25
CGB1A6NKQ9 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC16.6■□□□□ 0.25
CGB1A6NKQ9 AL358852.1-201ENST00000623174 1268 ntBASIC16.6■□□□□ 0.25
CGB1A6NKQ9 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.6■□□□□ 0.25
CGB1A6NKQ9 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CGB1A6NKQ9 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CGB1A6NKQ9 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CGB1A6NKQ9 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
CGB1A6NKQ9 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CGB1A6NKQ9 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
CGB1A6NKQ9 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CGB1A6NKQ9 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CGB1A6NKQ9 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CGB1A6NKQ9 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CGB1A6NKQ9 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CGB1A6NKQ9 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CGB1A6NKQ9 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CGB1A6NKQ9 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CGB1A6NKQ9 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CGB1A6NKQ9 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CGB1A6NKQ9 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CGB1A6NKQ9 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CGB1A6NKQ9 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.59■□□□□ 0.25
CGB1A6NKQ9 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CGB1A6NKQ9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
CGB1A6NKQ9 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CGB1A6NKQ9 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CGB1A6NKQ9 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CGB1A6NKQ9 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CGB1A6NKQ9 AC073130.3-201ENST00000624389 2278 ntBASIC16.59■□□□□ 0.25
CGB1A6NKQ9 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CGB1A6NKQ9 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CGB1A6NKQ9 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CGB1A6NKQ9 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CGB1A6NKQ9 AC006128.1-201ENST00000624704 1661 ntBASIC16.59■□□□□ 0.25
CGB1A6NKQ9 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.59■□□□□ 0.25
CGB1A6NKQ9 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CGB1A6NKQ9 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.59■□□□□ 0.25
CGB1A6NKQ9 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.58■□□□□ 0.25
CGB1A6NKQ9 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CGB1A6NKQ9 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CGB1A6NKQ9 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.58■□□□□ 0.24
CGB1A6NKQ9 AC105265.2-201ENST00000467189 838 ntBASIC16.58■□□□□ 0.24
CGB1A6NKQ9 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CGB1A6NKQ9 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC16.58■□□□□ 0.24
CGB1A6NKQ9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
CGB1A6NKQ9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CGB1A6NKQ9 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CGB1A6NKQ9 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
CGB1A6NKQ9 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CGB1A6NKQ9 AC061975.6-201ENST00000579045 1553 ntBASIC16.58■□□□□ 0.24
CGB1A6NKQ9 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CGB1A6NKQ9 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.58■□□□□ 0.24
CGB1A6NKQ9 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CGB1A6NKQ9 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CGB1A6NKQ9 FEM1AP1-201ENST00000431297 1995 ntBASIC16.58■□□□□ 0.24
CGB1A6NKQ9 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
CGB1A6NKQ9 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.58■□□□□ 0.24
CGB1A6NKQ9 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CGB1A6NKQ9 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC16.58■□□□□ 0.24
CGB1A6NKQ9 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CGB1A6NKQ9 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CGB1A6NKQ9 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.57■□□□□ 0.24
CGB1A6NKQ9 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC16.57■□□□□ 0.24
CGB1A6NKQ9 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.57■□□□□ 0.24
CGB1A6NKQ9 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CGB1A6NKQ9 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.57■□□□□ 0.24
CGB1A6NKQ9 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CGB1A6NKQ9 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
CGB1A6NKQ9 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.57■□□□□ 0.24
CGB1A6NKQ9 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CGB1A6NKQ9 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CGB1A6NKQ9 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CGB1A6NKQ9 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CGB1A6NKQ9 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CGB1A6NKQ9 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CGB1A6NKQ9 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CGB1A6NKQ9 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.57■□□□□ 0.24
CGB1A6NKQ9 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CGB1A6NKQ9 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CGB1A6NKQ9 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
CGB1A6NKQ9 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.57■□□□□ 0.24
CGB1A6NKQ9 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.57■□□□□ 0.24
CGB1A6NKQ9 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.57■□□□□ 0.24
CGB1A6NKQ9 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CGB1A6NKQ9 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CGB1A6NKQ9 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.56■□□□□ 0.24
CGB1A6NKQ9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.56■□□□□ 0.24
CGB1A6NKQ9 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CGB1A6NKQ9 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CGB1A6NKQ9 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CGB1A6NKQ9 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CGB1A6NKQ9 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CGB1A6NKQ9 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms