Protein–RNA interactions for Protein: A6NI28

ARHGAP42, Rho GTPase-activating protein 42, humanhuman

Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP42A6NI28 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
ARHGAP42A6NI28 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
ARHGAP42A6NI28 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
ARHGAP42A6NI28 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
ARHGAP42A6NI28 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ARHGAP42A6NI28 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ARHGAP42A6NI28 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ARHGAP42A6NI28 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ARHGAP42A6NI28 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ARHGAP42A6NI28 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
ARHGAP42A6NI28 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ARHGAP42A6NI28 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ARHGAP42A6NI28 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ARHGAP42A6NI28 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.52■■□□□ 1.04
ARHGAP42A6NI28 AC120498.10-201ENST00000621827 505 ntBASIC21.52■■□□□ 1.04
ARHGAP42A6NI28 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.52■■□□□ 1.04
ARHGAP42A6NI28 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
ARHGAP42A6NI28 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ARHGAP42A6NI28 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
ARHGAP42A6NI28 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.51■■□□□ 1.03
ARHGAP42A6NI28 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ARHGAP42A6NI28 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
ARHGAP42A6NI28 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.51■■□□□ 1.03
ARHGAP42A6NI28 FEM1AP4-201ENST00000443167 1987 ntBASIC21.51■■□□□ 1.03
ARHGAP42A6NI28 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ARHGAP42A6NI28 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ARHGAP42A6NI28 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.51■■□□□ 1.03
ARHGAP42A6NI28 KRT18P20-201ENST00000548986 1279 ntBASIC21.51■■□□□ 1.03
ARHGAP42A6NI28 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.51■■□□□ 1.03
ARHGAP42A6NI28 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ARHGAP42A6NI28 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ARHGAP42A6NI28 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGAP42A6NI28 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGAP42A6NI28 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGAP42A6NI28 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGAP42A6NI28 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGAP42A6NI28 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
ARHGAP42A6NI28 AC061975.6-201ENST00000579045 1553 ntBASIC21.5■■□□□ 1.03
ARHGAP42A6NI28 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGAP42A6NI28 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
ARHGAP42A6NI28 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.5■■□□□ 1.03
ARHGAP42A6NI28 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGAP42A6NI28 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGAP42A6NI28 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.5■■□□□ 1.03
ARHGAP42A6NI28 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.5■■□□□ 1.03
ARHGAP42A6NI28 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
ARHGAP42A6NI28 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.5■■□□□ 1.03
ARHGAP42A6NI28 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.5■■□□□ 1.03
ARHGAP42A6NI28 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGAP42A6NI28 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
ARHGAP42A6NI28 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGAP42A6NI28 AC005229.4-201ENST00000610085 2198 ntBASIC21.5■■□□□ 1.03
ARHGAP42A6NI28 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGAP42A6NI28 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGAP42A6NI28 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGAP42A6NI28 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGAP42A6NI28 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGAP42A6NI28 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.49■■□□□ 1.03
ARHGAP42A6NI28 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGAP42A6NI28 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.49■■□□□ 1.03
ARHGAP42A6NI28 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGAP42A6NI28 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGAP42A6NI28 AF106564.1-201ENST00000607058 2553 ntBASIC21.49■■□□□ 1.03
ARHGAP42A6NI28 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.49■■□□□ 1.03
ARHGAP42A6NI28 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.49■■□□□ 1.03
ARHGAP42A6NI28 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGAP42A6NI28 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGAP42A6NI28 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGAP42A6NI28 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGAP42A6NI28 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ARHGAP42A6NI28 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
ARHGAP42A6NI28 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ARHGAP42A6NI28 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ARHGAP42A6NI28 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ARHGAP42A6NI28 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ARHGAP42A6NI28 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ARHGAP42A6NI28 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ARHGAP42A6NI28 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.48■■□□□ 1.03
ARHGAP42A6NI28 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.48■■□□□ 1.03
ARHGAP42A6NI28 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ARHGAP42A6NI28 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
ARHGAP42A6NI28 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.48■■□□□ 1.03
ARHGAP42A6NI28 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ARHGAP42A6NI28 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ARHGAP42A6NI28 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
ARHGAP42A6NI28 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
ARHGAP42A6NI28 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ARHGAP42A6NI28 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ARHGAP42A6NI28 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ARHGAP42A6NI28 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.47■■□□□ 1.03
ARHGAP42A6NI28 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.47■■□□□ 1.03
ARHGAP42A6NI28 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.47■■□□□ 1.03
ARHGAP42A6NI28 AC137761.2-201ENST00000561729 223 ntBASIC21.47■■□□□ 1.03
ARHGAP42A6NI28 AC145350.3-201ENST00000569033 163 ntBASIC21.47■■□□□ 1.03
ARHGAP42A6NI28 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ARHGAP42A6NI28 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ARHGAP42A6NI28 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ARHGAP42A6NI28 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ARHGAP42A6NI28 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.46■■□□□ 1.03
ARHGAP42A6NI28 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms