Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TMEM235A6NFC5 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM235A6NFC5 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TMEM235A6NFC5 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM235A6NFC5 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM235A6NFC5 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM235A6NFC5 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
TMEM235A6NFC5 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM235A6NFC5 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM235A6NFC5 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM235A6NFC5 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.71■□□□□ 0.43
TMEM235A6NFC5 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM235A6NFC5 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.71■□□□□ 0.43
TMEM235A6NFC5 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM235A6NFC5 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.71■□□□□ 0.43
TMEM235A6NFC5 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM235A6NFC5 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
TMEM235A6NFC5 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TMEM235A6NFC5 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.71■□□□□ 0.42
TMEM235A6NFC5 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM235A6NFC5 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TMEM235A6NFC5 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEM235A6NFC5 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM235A6NFC5 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM235A6NFC5 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM235A6NFC5 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM235A6NFC5 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TMEM235A6NFC5 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEM235A6NFC5 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TMEM235A6NFC5 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEM235A6NFC5 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM235A6NFC5 AP005435.1-201ENST00000529293 1178 ntBASIC17.7■□□□□ 0.42
TMEM235A6NFC5 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.7■□□□□ 0.42
TMEM235A6NFC5 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM235A6NFC5 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEM235A6NFC5 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM235A6NFC5 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM235A6NFC5 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM235A6NFC5 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.69■□□□□ 0.42
TMEM235A6NFC5 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM235A6NFC5 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM235A6NFC5 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TMEM235A6NFC5 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM235A6NFC5 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.69■□□□□ 0.42
TMEM235A6NFC5 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM235A6NFC5 SLC47A1P1-202ENST00000449666 945 ntBASIC17.69■□□□□ 0.42
TMEM235A6NFC5 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.69■□□□□ 0.42
TMEM235A6NFC5 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.69■□□□□ 0.42
TMEM235A6NFC5 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.69■□□□□ 0.42
TMEM235A6NFC5 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
TMEM235A6NFC5 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.69■□□□□ 0.42
TMEM235A6NFC5 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.69■□□□□ 0.42
TMEM235A6NFC5 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM235A6NFC5 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.69■□□□□ 0.42
TMEM235A6NFC5 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM235A6NFC5 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM235A6NFC5 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM235A6NFC5 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.68■□□□□ 0.42
TMEM235A6NFC5 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM235A6NFC5 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEM235A6NFC5 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEM235A6NFC5 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.68■□□□□ 0.42
TMEM235A6NFC5 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEM235A6NFC5 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM235A6NFC5 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TMEM235A6NFC5 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM235A6NFC5 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM235A6NFC5 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM235A6NFC5 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEM235A6NFC5 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TMEM235A6NFC5 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEM235A6NFC5 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEM235A6NFC5 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.68■□□□□ 0.42
TMEM235A6NFC5 MIR3621-201ENST00000580529 85 ntBASIC17.68■□□□□ 0.42
TMEM235A6NFC5 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEM235A6NFC5 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.68■□□□□ 0.42
TMEM235A6NFC5 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM235A6NFC5 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM235A6NFC5 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM235A6NFC5 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM235A6NFC5 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM235A6NFC5 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM235A6NFC5 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TMEM235A6NFC5 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM235A6NFC5 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM235A6NFC5 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM235A6NFC5 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM235A6NFC5 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM235A6NFC5 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM235A6NFC5 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.67■□□□□ 0.42
TMEM235A6NFC5 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM235A6NFC5 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM235A6NFC5 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM235A6NFC5 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM235A6NFC5 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TMEM235A6NFC5 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
TMEM235A6NFC5 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TMEM235A6NFC5 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM235A6NFC5 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM235A6NFC5 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms