Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC32.32■■■□□ 2.76
PLEKHD1A6NEE1 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC32.32■■■□□ 2.76
PLEKHD1A6NEE1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC32.32■■■□□ 2.76
PLEKHD1A6NEE1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC32.31■■■□□ 2.76
PLEKHD1A6NEE1 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
PLEKHD1A6NEE1 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
PLEKHD1A6NEE1 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
PLEKHD1A6NEE1 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
PLEKHD1A6NEE1 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
PLEKHD1A6NEE1 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
PLEKHD1A6NEE1 MIR1224-201ENST00000408193 85 ntBASIC32.31■■■□□ 2.76
PLEKHD1A6NEE1 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
PLEKHD1A6NEE1 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
PLEKHD1A6NEE1 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC32.31■■■□□ 2.76
PLEKHD1A6NEE1 AC105020.6-201ENST00000621523 1217 ntBASIC32.31■■■□□ 2.76
PLEKHD1A6NEE1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC32.31■■■□□ 2.76
PLEKHD1A6NEE1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
PLEKHD1A6NEE1 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC32.3■■■□□ 2.76
PLEKHD1A6NEE1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
PLEKHD1A6NEE1 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
PLEKHD1A6NEE1 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC32.3■■■□□ 2.76
PLEKHD1A6NEE1 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
PLEKHD1A6NEE1 NARF-205ENST00000412079 1760 ntTSL 5 BASIC32.3■■■□□ 2.76
PLEKHD1A6NEE1 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
PLEKHD1A6NEE1 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
PLEKHD1A6NEE1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC32.29■■■□□ 2.76
PLEKHD1A6NEE1 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC32.29■■■□□ 2.76
PLEKHD1A6NEE1 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
PLEKHD1A6NEE1 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
PLEKHD1A6NEE1 AC012618.2-201ENST00000428058 849 ntBASIC32.29■■■□□ 2.76
PLEKHD1A6NEE1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC32.29■■■□□ 2.76
PLEKHD1A6NEE1 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC32.29■■■□□ 2.76
PLEKHD1A6NEE1 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC32.29■■■□□ 2.76
PLEKHD1A6NEE1 AC233702.5-201ENST00000584107 538 ntBASIC32.29■■■□□ 2.76
PLEKHD1A6NEE1 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
PLEKHD1A6NEE1 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC32.29■■■□□ 2.76
PLEKHD1A6NEE1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC32.29■■■□□ 2.76
PLEKHD1A6NEE1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC32.28■■■□□ 2.76
PLEKHD1A6NEE1 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC32.28■■■□□ 2.76
PLEKHD1A6NEE1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC32.28■■■□□ 2.76
PLEKHD1A6NEE1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC32.28■■■□□ 2.76
PLEKHD1A6NEE1 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC32.28■■■□□ 2.76
PLEKHD1A6NEE1 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
PLEKHD1A6NEE1 LINC01023-201ENST00000606054 436 ntBASIC32.28■■■□□ 2.76
PLEKHD1A6NEE1 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC32.28■■■□□ 2.76
PLEKHD1A6NEE1 AC068473.5-201ENST00000616428 2072 ntBASIC32.28■■■□□ 2.76
PLEKHD1A6NEE1 PKM-204ENST00000449901 2526 ntTSL 2 BASIC32.28■■■□□ 2.76
PLEKHD1A6NEE1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC32.28■■■□□ 2.76
PLEKHD1A6NEE1 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC32.28■■■□□ 2.76
PLEKHD1A6NEE1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
PLEKHD1A6NEE1 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC32.27■■■□□ 2.76
PLEKHD1A6NEE1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC32.27■■■□□ 2.76
PLEKHD1A6NEE1 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
PLEKHD1A6NEE1 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
PLEKHD1A6NEE1 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC32.27■■■□□ 2.76
PLEKHD1A6NEE1 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
PLEKHD1A6NEE1 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
PLEKHD1A6NEE1 AC010542.4-201ENST00000563151 1910 ntBASIC32.27■■■□□ 2.76
PLEKHD1A6NEE1 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC32.27■■■□□ 2.76
PLEKHD1A6NEE1 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
PLEKHD1A6NEE1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC32.27■■■□□ 2.76
PLEKHD1A6NEE1 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC32.26■■■□□ 2.76
PLEKHD1A6NEE1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
PLEKHD1A6NEE1 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
PLEKHD1A6NEE1 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
PLEKHD1A6NEE1 RPS2P55-201ENST00000397318 883 ntBASIC32.26■■■□□ 2.75
PLEKHD1A6NEE1 AC107956.1-201ENST00000494359 873 ntBASIC32.26■■■□□ 2.75
PLEKHD1A6NEE1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC32.26■■■□□ 2.75
PLEKHD1A6NEE1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC32.26■■■□□ 2.75
PLEKHD1A6NEE1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC32.26■■■□□ 2.75
PLEKHD1A6NEE1 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC32.26■■■□□ 2.75
PLEKHD1A6NEE1 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
PLEKHD1A6NEE1 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC32.26■■■□□ 2.75
PLEKHD1A6NEE1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC32.26■■■□□ 2.75
PLEKHD1A6NEE1 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
PLEKHD1A6NEE1 BX088651.1-201ENST00000540551 451 ntBASIC32.25■■■□□ 2.75
PLEKHD1A6NEE1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
PLEKHD1A6NEE1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC32.24■■■□□ 2.75
PLEKHD1A6NEE1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC32.24■■■□□ 2.75
PLEKHD1A6NEE1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
PLEKHD1A6NEE1 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
PLEKHD1A6NEE1 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC32.24■■■□□ 2.75
PLEKHD1A6NEE1 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC32.24■■■□□ 2.75
PLEKHD1A6NEE1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC32.24■■■□□ 2.75
PLEKHD1A6NEE1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
PLEKHD1A6NEE1 MTDHP1-201ENST00000605323 784 ntBASIC32.24■■■□□ 2.75
PLEKHD1A6NEE1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
PLEKHD1A6NEE1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC32.24■■■□□ 2.75
PLEKHD1A6NEE1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC32.24■■■□□ 2.75
PLEKHD1A6NEE1 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
PLEKHD1A6NEE1 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC32.24■■■□□ 2.75
PLEKHD1A6NEE1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC32.23■■■□□ 2.75
PLEKHD1A6NEE1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
PLEKHD1A6NEE1 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
PLEKHD1A6NEE1 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC32.23■■■□□ 2.75
PLEKHD1A6NEE1 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC32.23■■■□□ 2.75
PLEKHD1A6NEE1 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC32.23■■■□□ 2.75
PLEKHD1A6NEE1 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC32.23■■■□□ 2.75
PLEKHD1A6NEE1 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC32.23■■■□□ 2.75
PLEKHD1A6NEE1 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms