Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
SHISA3A0PJX4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
SHISA3A0PJX4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHISA3A0PJX4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHISA3A0PJX4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHISA3A0PJX4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.15■□□□□ 0.5
SHISA3A0PJX4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SHISA3A0PJX4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.14■□□□□ 0.5
SHISA3A0PJX4 AC125437.2-201ENST00000625180 2167 ntBASIC18.14■□□□□ 0.49
SHISA3A0PJX4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHISA3A0PJX4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SHISA3A0PJX4 TCF3P1-201ENST00000423021 1937 ntBASIC18.14■□□□□ 0.49
SHISA3A0PJX4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHISA3A0PJX4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHISA3A0PJX4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SHISA3A0PJX4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.14■□□□□ 0.49
SHISA3A0PJX4 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SHISA3A0PJX4 MIR6724-1-201ENST00000616420 92 ntBASIC18.14■□□□□ 0.49
SHISA3A0PJX4 MIR6724-2-201ENST00000616483 92 ntBASIC18.14■□□□□ 0.49
SHISA3A0PJX4 MIR6724-4-201ENST00000617390 92 ntBASIC18.14■□□□□ 0.49
SHISA3A0PJX4 MIR6724-3-201ENST00000622482 92 ntBASIC18.14■□□□□ 0.49
SHISA3A0PJX4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHISA3A0PJX4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.14■□□□□ 0.49
SHISA3A0PJX4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SHISA3A0PJX4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHISA3A0PJX4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SHISA3A0PJX4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
SHISA3A0PJX4 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHISA3A0PJX4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHISA3A0PJX4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SHISA3A0PJX4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHISA3A0PJX4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHISA3A0PJX4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SHISA3A0PJX4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHISA3A0PJX4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SHISA3A0PJX4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
SHISA3A0PJX4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.13■□□□□ 0.49
SHISA3A0PJX4 AC239859.2-201ENST00000444165 318 ntBASIC18.13■□□□□ 0.49
SHISA3A0PJX4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.13■□□□□ 0.49
SHISA3A0PJX4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.13■□□□□ 0.49
SHISA3A0PJX4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHISA3A0PJX4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SHISA3A0PJX4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHISA3A0PJX4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SHISA3A0PJX4 AC018445.3-201ENST00000624177 1945 ntBASIC18.13■□□□□ 0.49
SHISA3A0PJX4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHISA3A0PJX4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.13■□□□□ 0.49
SHISA3A0PJX4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHISA3A0PJX4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SHISA3A0PJX4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SHISA3A0PJX4 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHISA3A0PJX4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHISA3A0PJX4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.12■□□□□ 0.49
SHISA3A0PJX4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SHISA3A0PJX4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHISA3A0PJX4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.12■□□□□ 0.49
SHISA3A0PJX4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SHISA3A0PJX4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SHISA3A0PJX4 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
SHISA3A0PJX4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SHISA3A0PJX4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.12■□□□□ 0.49
SHISA3A0PJX4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SHISA3A0PJX4 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.12■□□□□ 0.49
SHISA3A0PJX4 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.12■□□□□ 0.49
SHISA3A0PJX4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHISA3A0PJX4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHISA3A0PJX4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SHISA3A0PJX4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHISA3A0PJX4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHISA3A0PJX4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHISA3A0PJX4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHISA3A0PJX4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SHISA3A0PJX4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHISA3A0PJX4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
SHISA3A0PJX4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.11■□□□□ 0.49
SHISA3A0PJX4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHISA3A0PJX4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHISA3A0PJX4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SHISA3A0PJX4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHISA3A0PJX4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHISA3A0PJX4 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHISA3A0PJX4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.11■□□□□ 0.49
SHISA3A0PJX4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.11■□□□□ 0.49
SHISA3A0PJX4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.11■□□□□ 0.49
SHISA3A0PJX4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.11■□□□□ 0.49
SHISA3A0PJX4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SHISA3A0PJX4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SHISA3A0PJX4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SHISA3A0PJX4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.11■□□□□ 0.49
SHISA3A0PJX4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHISA3A0PJX4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SHISA3A0PJX4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHISA3A0PJX4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SHISA3A0PJX4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.1■□□□□ 0.49
SHISA3A0PJX4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.1■□□□□ 0.49
SHISA3A0PJX4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SHISA3A0PJX4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.1■□□□□ 0.49
SHISA3A0PJX4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SHISA3A0PJX4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHISA3A0PJX4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 377.3 ms