Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV25A0A0B4J276 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV25A0A0B4J276 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV25A0A0B4J276 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV25A0A0B4J276 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV25A0A0B4J276 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV25A0A0B4J276 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV25A0A0B4J276 CDCA4P2-201ENST00000441182 718 ntBASIC15.64■□□□□ 0.09
TRAV25A0A0B4J276 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV25A0A0B4J276 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV25A0A0B4J276 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
TRAV25A0A0B4J276 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC15.64■□□□□ 0.09
TRAV25A0A0B4J276 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV25A0A0B4J276 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV25A0A0B4J276 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV25A0A0B4J276 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TRAV25A0A0B4J276 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV25A0A0B4J276 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV25A0A0B4J276 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV25A0A0B4J276 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV25A0A0B4J276 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV25A0A0B4J276 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV25A0A0B4J276 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV25A0A0B4J276 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV25A0A0B4J276 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV25A0A0B4J276 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAV25A0A0B4J276 STK25-234ENST00000535007 2459 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV25A0A0B4J276 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAV25A0A0B4J276 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV25A0A0B4J276 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV25A0A0B4J276 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV25A0A0B4J276 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV25A0A0B4J276 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV25A0A0B4J276 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
TRAV25A0A0B4J276 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV25A0A0B4J276 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV25A0A0B4J276 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRAV25A0A0B4J276 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV25A0A0B4J276 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV25A0A0B4J276 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV25A0A0B4J276 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
TRAV25A0A0B4J276 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC15.62■□□□□ 0.09
TRAV25A0A0B4J276 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV25A0A0B4J276 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC15.62■□□□□ 0.09
TRAV25A0A0B4J276 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV25A0A0B4J276 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV25A0A0B4J276 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
TRAV25A0A0B4J276 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV25A0A0B4J276 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV25A0A0B4J276 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV25A0A0B4J276 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV25A0A0B4J276 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV25A0A0B4J276 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV25A0A0B4J276 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV25A0A0B4J276 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRAV25A0A0B4J276 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV25A0A0B4J276 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV25A0A0B4J276 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TRAV25A0A0B4J276 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV25A0A0B4J276 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV25A0A0B4J276 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
TRAV25A0A0B4J276 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRAV25A0A0B4J276 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV25A0A0B4J276 DYM-203ENST00000442713 2147 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV25A0A0B4J276 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC15.61■□□□□ 0.09
TRAV25A0A0B4J276 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TRAV25A0A0B4J276 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV25A0A0B4J276 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV25A0A0B4J276 SAPCD2P1-201ENST00000395413 1184 ntBASIC15.61■□□□□ 0.09
TRAV25A0A0B4J276 AC091799.1-201ENST00000422823 811 ntBASIC15.61■□□□□ 0.09
TRAV25A0A0B4J276 CNN2P6-201ENST00000439038 900 ntBASIC15.61■□□□□ 0.09
TRAV25A0A0B4J276 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV25A0A0B4J276 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV25A0A0B4J276 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV25A0A0B4J276 AC069236.1-201ENST00000604339 616 ntBASIC15.61■□□□□ 0.09
TRAV25A0A0B4J276 AC005181.1-201ENST00000604782 1256 ntBASIC15.61■□□□□ 0.09
TRAV25A0A0B4J276 RAP2CP1-201ENST00000605103 478 ntBASIC15.61■□□□□ 0.09
TRAV25A0A0B4J276 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV25A0A0B4J276 AC008694.1-202ENST00000636953 945 ntBASIC15.61■□□□□ 0.09
TRAV25A0A0B4J276 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV25A0A0B4J276 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV25A0A0B4J276 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV25A0A0B4J276 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
TRAV25A0A0B4J276 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV25A0A0B4J276 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC15.61■□□□□ 0.09
TRAV25A0A0B4J276 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRAV25A0A0B4J276 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV25A0A0B4J276 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV25A0A0B4J276 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV25A0A0B4J276 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV25A0A0B4J276 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV25A0A0B4J276 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV25A0A0B4J276 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV25A0A0B4J276 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV25A0A0B4J276 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV25A0A0B4J276 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV25A0A0B4J276 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
TRAV25A0A0B4J276 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV25A0A0B4J276 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV25A0A0B4J276 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms