Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV34A0A0B4J273 AC133637.1-201ENST00000624115 1537 ntBASIC16.04■□□□□ 0.16
TRAV34A0A0B4J273 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV34A0A0B4J273 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV34A0A0B4J273 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV34A0A0B4J273 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
TRAV34A0A0B4J273 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV34A0A0B4J273 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV34A0A0B4J273 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV34A0A0B4J273 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV34A0A0B4J273 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
TRAV34A0A0B4J273 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV34A0A0B4J273 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV34A0A0B4J273 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC16.03■□□□□ 0.16
TRAV34A0A0B4J273 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV34A0A0B4J273 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV34A0A0B4J273 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV34A0A0B4J273 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV34A0A0B4J273 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV34A0A0B4J273 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV34A0A0B4J273 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV34A0A0B4J273 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV34A0A0B4J273 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV34A0A0B4J273 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV34A0A0B4J273 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV34A0A0B4J273 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAV34A0A0B4J273 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TRAV34A0A0B4J273 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV34A0A0B4J273 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV34A0A0B4J273 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV34A0A0B4J273 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV34A0A0B4J273 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TRAV34A0A0B4J273 HCG11-201ENST00000411553 5696 ntBASIC16.02■□□□□ 0.16
TRAV34A0A0B4J273 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV34A0A0B4J273 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV34A0A0B4J273 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV34A0A0B4J273 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAV34A0A0B4J273 AC090340.1-201ENST00000620778 4980 ntBASIC16.02■□□□□ 0.16
TRAV34A0A0B4J273 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV34A0A0B4J273 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAV34A0A0B4J273 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV34A0A0B4J273 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
TRAV34A0A0B4J273 GTSE1-AS1-202ENST00000623117 1518 ntBASIC16.02■□□□□ 0.15
TRAV34A0A0B4J273 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV34A0A0B4J273 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV34A0A0B4J273 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
TRAV34A0A0B4J273 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV34A0A0B4J273 AC006128.1-201ENST00000624704 1661 ntBASIC16.02■□□□□ 0.15
TRAV34A0A0B4J273 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV34A0A0B4J273 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.02■□□□□ 0.15
TRAV34A0A0B4J273 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
TRAV34A0A0B4J273 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV34A0A0B4J273 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV34A0A0B4J273 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV34A0A0B4J273 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV34A0A0B4J273 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV34A0A0B4J273 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV34A0A0B4J273 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV34A0A0B4J273 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
TRAV34A0A0B4J273 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TRAV34A0A0B4J273 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TRAV34A0A0B4J273 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV34A0A0B4J273 TFPT-201ENST00000391757 774 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAV34A0A0B4J273 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV34A0A0B4J273 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TRAV34A0A0B4J273 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV34A0A0B4J273 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV34A0A0B4J273 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV34A0A0B4J273 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV34A0A0B4J273 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TRAV34A0A0B4J273 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV34A0A0B4J273 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV34A0A0B4J273 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TRAV34A0A0B4J273 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV34A0A0B4J273 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV34A0A0B4J273 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAV34A0A0B4J273 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV34A0A0B4J273 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV34A0A0B4J273 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV34A0A0B4J273 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
TRAV34A0A0B4J273 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TRAV34A0A0B4J273 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV34A0A0B4J273 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV34A0A0B4J273 AC003102.1-202ENST00000563394 1796 ntBASIC16■□□□□ 0.15
TRAV34A0A0B4J273 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
TRAV34A0A0B4J273 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV34A0A0B4J273 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
TRAV34A0A0B4J273 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV34A0A0B4J273 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV34A0A0B4J273 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16■□□□□ 0.15
TRAV34A0A0B4J273 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16■□□□□ 0.15
TRAV34A0A0B4J273 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16■□□□□ 0.15
TRAV34A0A0B4J273 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC16■□□□□ 0.15
TRAV34A0A0B4J273 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC16■□□□□ 0.15
TRAV34A0A0B4J273 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV34A0A0B4J273 STX4-202ENST00000394998 1498 ntTSL 2 BASIC16■□□□□ 0.15
TRAV34A0A0B4J273 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV34A0A0B4J273 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC16■□□□□ 0.15
TRAV34A0A0B4J273 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC16■□□□□ 0.15
TRAV34A0A0B4J273 AC012354.3-201ENST00000623734 483 ntBASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms