Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC14.67□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC14.67□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 AL031432.3-201ENST00000607698 485 ntBASIC14.67□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC14.66□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC14.65□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC14.65□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 MAG-206ENST00000597035 542 ntTSL 4 BASIC14.65□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
TRAV8-3A0A0A6YYJ7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV8-3A0A0A6YYJ7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-3A0A0A6YYJ7 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-3A0A0A6YYJ7 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-3A0A0A6YYJ7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-3A0A0A6YYJ7 AC007952.6-201ENST00000573168 2673 ntBASIC14.64□□□□□ -0.07
TRAV8-3A0A0A6YYJ7 AC003957.1-201ENST00000625108 2673 ntBASIC14.64□□□□□ -0.07
TRAV8-3A0A0A6YYJ7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
TRAV8-3A0A0A6YYJ7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
TRAV8-3A0A0A6YYJ7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
TRAV8-3A0A0A6YYJ7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV8-3A0A0A6YYJ7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV8-3A0A0A6YYJ7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-3A0A0A6YYJ7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-3A0A0A6YYJ7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
TRAV8-3A0A0A6YYJ7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV8-3A0A0A6YYJ7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms