Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 INTS12-201ENST00000340139 1710 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 CCDC144A-206ENST00000399273 8686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 OGDH-207ENST00000449767 3479 ntAPPRIS ALT1 TSL 2 BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 ANK2-216ENST00000510275 1770 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 TEX9-202ENST00000537232 1768 ntTSL 2 BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 B4GALNT2-203ENST00000504681 1819 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 ATP8A1-202ENST00000381668 8270 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 ZSWIM1-202ENST00000372523 2769 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 SERPINB11-201ENST00000382749 1918 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 AC004801.7-201ENST00000624535 2973 ntBASIC10.72□□□□□ -0.69
LMO3Q8TAP4 GIMAP4-201ENST00000255945 2060 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 GRIA1-209ENST00000518783 5233 ntTSL 2 BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 RAD17-213ENST00000509734 3233 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 USP11-201ENST00000218348 3338 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 ZNF215-201ENST00000278319 3448 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 RASGEF1B-213ENST00000613784 3485 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 SS18-205ENST00000542420 2321 ntTSL 2 BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 ARHGAP5-204ENST00000432921 5003 ntTSL 5 BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 PPY-201ENST00000225992 460 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 VAMP8-201ENST00000263864 774 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 OR6Y1-201ENST00000302617 978 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 PA2G4P2-201ENST00000414718 1200 ntBASIC10.72□□□□□ -0.69
LMO3Q8TAP4 AL031575.1-201ENST00000416609 845 ntBASIC10.72□□□□□ -0.69
LMO3Q8TAP4 BX284668.1-202ENST00000422345 735 ntTSL 5 BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 PNLIPP1-201ENST00000439233 675 ntBASIC10.72□□□□□ -0.69
LMO3Q8TAP4 MRPS16P2-201ENST00000445106 408 ntBASIC10.72□□□□□ -0.69
LMO3Q8TAP4 BANF1P5-201ENST00000445285 259 ntBASIC10.72□□□□□ -0.69
LMO3Q8TAP4 HNF4A-AS1-201ENST00000452481 648 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 RPL13P6-201ENST00000488133 626 ntBASIC10.72□□□□□ -0.69
LMO3Q8TAP4 TRMT112P1-201ENST00000505515 351 ntBASIC10.72□□□□□ -0.69
LMO3Q8TAP4 NCBP2L-201ENST00000509000 660 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 RNA5SP411-201ENST00000516136 114 ntBASIC10.72□□□□□ -0.69
LMO3Q8TAP4 ACA64.6-201ENST00000516310 117 ntBASIC10.72□□□□□ -0.69
LMO3Q8TAP4 AC021915.2-201ENST00000520496 635 ntTSL 2 BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 ZNF317P1-201ENST00000521453 1027 ntBASIC10.72□□□□□ -0.69
LMO3Q8TAP4 MTFR1L-215ENST00000524618 1217 ntTSL 2 BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 AC022762.1-201ENST00000529961 816 ntTSL 5 BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 ARL1-210ENST00000551688 470 ntTSL 4 BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 AC100836.1-201ENST00000557426 877 ntTSL 3 BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 ALOX12-AS1-209ENST00000575889 439 ntTSL 3 BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 AC005726.6-201ENST00000579019 1083 ntTSL 3 BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 TOMM20P3-201ENST00000579772 389 ntBASIC10.72□□□□□ -0.69
LMO3Q8TAP4 ST6GALNAC1-207ENST00000589992 419 ntTSL 2 BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 ZNF738-203ENST00000594245 1086 ntTSL 2 BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 AC011466.2-201ENST00000594589 359 ntTSL 5 BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 ZNF546-204ENST00000596894 714 ntTSL 3 BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 AC123912.4-201ENST00000596996 1178 ntTSL 2 BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 AL117335.1-201ENST00000620919 678 ntTSL 3 BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 AC092653.2-201ENST00000624373 513 ntBASIC10.72□□□□□ -0.69
LMO3Q8TAP4 ZNF226-202ENST00000337433 2565 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 PITRM1-203ENST00000380994 2579 ntTSL 5 BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 HIST1H3E-202ENST00000634733 2679 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 KRBOX4-201ENST00000298190 1354 ntAPPRIS P3 TSL 2 BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 AC009169.1-201ENST00000563784 1377 ntBASIC10.72□□□□□ -0.69
LMO3Q8TAP4 PLP1-221ENST00000619236 2896 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 LINC01662-202ENST00000611876 1559 ntBASIC10.72□□□□□ -0.69
LMO3Q8TAP4 SALL2-206ENST00000613414 1566 ntTSL 2 BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 VTA1-205ENST00000620996 3272 ntTSL 3 BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 LINC00402-201ENST00000419499 3340 ntTSL 2 BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 GLI1-208ENST00000546141 3475 ntTSL 5 BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 NXPE2-201ENST00000389586 1873 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 ADGRG1-216ENST00000562631 4042 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 HLCS-202ENST00000399120 6466 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 AL133355.1-201ENST00000568017 2388 ntBASIC10.72□□□□□ -0.69
LMO3Q8TAP4 MAPKBP1-202ENST00000457542 7232 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 RBM33-207ENST00000401878 10149 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
LMO3Q8TAP4 SEC16A-206ENST00000431893 6465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
LMO3Q8TAP4 POM121-204ENST00000446813 3456 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
LMO3Q8TAP4 SNHG16-201ENST00000448136 3607 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LMO3Q8TAP4 ITGA7-206ENST00000553804 3935 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
LMO3Q8TAP4 RTCB-201ENST00000216038 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LMO3Q8TAP4 GLA-201ENST00000218516 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LMO3Q8TAP4 IL6-201ENST00000258743 1182 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LMO3Q8TAP4 LIPC-201ENST00000299022 2751 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LMO3Q8TAP4 SEC16A-204ENST00000313084 3073 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
LMO3Q8TAP4 CHST4-201ENST00000338482 2412 ntAPPRIS P1 TSL 4 BASIC10.71□□□□□ -0.69
LMO3Q8TAP4 GSG1-202ENST00000351606 1422 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LMO3Q8TAP4 HNRNPA1L2-201ENST00000357495 3011 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
LMO3Q8TAP4 RN7SKP291-201ENST00000362961 327 ntBASIC10.71□□□□□ -0.69
LMO3Q8TAP4 MIR5689HG-201ENST00000366312 656 ntTSL 3 BASIC10.71□□□□□ -0.69
LMO3Q8TAP4 CLRN3-201ENST00000368671 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LMO3Q8TAP4 AL353662.2-201ENST00000372214 645 ntBASIC10.71□□□□□ -0.69
LMO3Q8TAP4 GPR21-201ENST00000373642 1170 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
LMO3Q8TAP4 FAM189A2-203ENST00000377216 1385 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LMO3Q8TAP4 PDIA6-202ENST00000381611 2534 ntTSL 2 BASIC10.71□□□□□ -0.69
LMO3Q8TAP4 ANGPT4-201ENST00000381922 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LMO3Q8TAP4 CLEC4M-205ENST00000394122 1898 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
LMO3Q8TAP4 ZNF135-203ENST00000401053 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
LMO3Q8TAP4 SMARCE1P5-201ENST00000412207 1225 ntBASIC10.71□□□□□ -0.69
LMO3Q8TAP4 PPP1R12BP2-201ENST00000416956 639 ntBASIC10.71□□□□□ -0.69
LMO3Q8TAP4 LINC02087-201ENST00000418821 951 ntTSL 2 BASIC10.71□□□□□ -0.69
LMO3Q8TAP4 BMF-203ENST00000431415 492 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LMO3Q8TAP4 AL450306.1-201ENST00000434097 2028 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LMO3Q8TAP4 OR52P1P-201ENST00000438474 963 ntBASIC10.71□□□□□ -0.69
LMO3Q8TAP4 AL606469.1-201ENST00000443224 892 ntTSL 2 BASIC10.71□□□□□ -0.69
LMO3Q8TAP4 LINC00342-202ENST00000448494 2351 ntTSL 2 BASIC10.71□□□□□ -0.69
LMO3Q8TAP4 SPAG11A-206ENST00000454911 521 ntTSL 5 BASIC10.71□□□□□ -0.69
LMO3Q8TAP4 RPL36P4-201ENST00000456725 318 ntBASIC10.71□□□□□ -0.69
LMO3Q8TAP4 AP001993.1-201ENST00000527317 2337 ntTSL 2 BASIC10.71□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms