Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SCN10AQ9Y5Y9 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SCN10AQ9Y5Y9 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SCN10AQ9Y5Y9 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC23.05■■□□□ 1.28
SCN10AQ9Y5Y9 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC23.05■■□□□ 1.28
SCN10AQ9Y5Y9 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC23.05■■□□□ 1.28
SCN10AQ9Y5Y9 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC23.05■■□□□ 1.28
SCN10AQ9Y5Y9 STX5-203ENST00000394690 1568 ntTSL 5 BASIC23.05■■□□□ 1.28
SCN10AQ9Y5Y9 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
SCN10AQ9Y5Y9 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC23.05■■□□□ 1.28
SCN10AQ9Y5Y9 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
SCN10AQ9Y5Y9 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.05■■□□□ 1.28
SCN10AQ9Y5Y9 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SCN10AQ9Y5Y9 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.05■■□□□ 1.28
SCN10AQ9Y5Y9 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SCN10AQ9Y5Y9 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC23.05■■□□□ 1.28
SCN10AQ9Y5Y9 UBE2SP1-201ENST00000450587 669 ntBASIC23.05■■□□□ 1.28
SCN10AQ9Y5Y9 RPS2P4-201ENST00000476944 856 ntBASIC23.05■■□□□ 1.28
SCN10AQ9Y5Y9 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SCN10AQ9Y5Y9 AC233263.1-201ENST00000578059 224 ntBASIC23.05■■□□□ 1.28
SCN10AQ9Y5Y9 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
SCN10AQ9Y5Y9 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SCN10AQ9Y5Y9 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SCN10AQ9Y5Y9 C1orf229-201ENST00000623686 2258 ntBASIC23.04■■□□□ 1.28
SCN10AQ9Y5Y9 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC23.04■■□□□ 1.28
SCN10AQ9Y5Y9 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
SCN10AQ9Y5Y9 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SCN10AQ9Y5Y9 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SCN10AQ9Y5Y9 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC23.04■■□□□ 1.28
SCN10AQ9Y5Y9 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SCN10AQ9Y5Y9 SLC29A4P2-201ENST00000504749 1089 ntBASIC23.04■■□□□ 1.28
SCN10AQ9Y5Y9 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
SCN10AQ9Y5Y9 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SCN10AQ9Y5Y9 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC23.04■■□□□ 1.28
SCN10AQ9Y5Y9 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
SCN10AQ9Y5Y9 AC092368.3-202ENST00000574180 1591 ntBASIC23.04■■□□□ 1.28
SCN10AQ9Y5Y9 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SCN10AQ9Y5Y9 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.04■■□□□ 1.28
SCN10AQ9Y5Y9 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
SCN10AQ9Y5Y9 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.03■■□□□ 1.28
SCN10AQ9Y5Y9 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SCN10AQ9Y5Y9 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
SCN10AQ9Y5Y9 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
SCN10AQ9Y5Y9 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SCN10AQ9Y5Y9 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SCN10AQ9Y5Y9 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SCN10AQ9Y5Y9 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC23.03■■□□□ 1.28
SCN10AQ9Y5Y9 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
SCN10AQ9Y5Y9 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SCN10AQ9Y5Y9 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SCN10AQ9Y5Y9 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SCN10AQ9Y5Y9 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC23.03■■□□□ 1.28
SCN10AQ9Y5Y9 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SCN10AQ9Y5Y9 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SCN10AQ9Y5Y9 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SCN10AQ9Y5Y9 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SCN10AQ9Y5Y9 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC23.03■■□□□ 1.28
SCN10AQ9Y5Y9 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SCN10AQ9Y5Y9 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
SCN10AQ9Y5Y9 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SCN10AQ9Y5Y9 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SCN10AQ9Y5Y9 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SCN10AQ9Y5Y9 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SCN10AQ9Y5Y9 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.02■■□□□ 1.28
SCN10AQ9Y5Y9 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SCN10AQ9Y5Y9 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SCN10AQ9Y5Y9 PEX7-202ENST00000367756 680 ntTSL 3 BASIC23.02■■□□□ 1.28
SCN10AQ9Y5Y9 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
SCN10AQ9Y5Y9 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC23.02■■□□□ 1.28
SCN10AQ9Y5Y9 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
SCN10AQ9Y5Y9 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SCN10AQ9Y5Y9 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC23.02■■□□□ 1.28
SCN10AQ9Y5Y9 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SCN10AQ9Y5Y9 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SCN10AQ9Y5Y9 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SCN10AQ9Y5Y9 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SCN10AQ9Y5Y9 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC23.02■■□□□ 1.28
SCN10AQ9Y5Y9 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.02■■□□□ 1.27
SCN10AQ9Y5Y9 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC23.01■■□□□ 1.27
SCN10AQ9Y5Y9 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SCN10AQ9Y5Y9 KRT18P68-201ENST00000392293 1000 ntBASIC23.01■■□□□ 1.27
SCN10AQ9Y5Y9 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC23.01■■□□□ 1.27
SCN10AQ9Y5Y9 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC23.01■■□□□ 1.27
SCN10AQ9Y5Y9 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC23.01■■□□□ 1.27
SCN10AQ9Y5Y9 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SCN10AQ9Y5Y9 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC23.01■■□□□ 1.27
SCN10AQ9Y5Y9 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC23.01■■□□□ 1.27
SCN10AQ9Y5Y9 AC087633.2-202ENST00000565166 1439 ntBASIC23.01■■□□□ 1.27
SCN10AQ9Y5Y9 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC23.01■■□□□ 1.27
SCN10AQ9Y5Y9 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SCN10AQ9Y5Y9 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SCN10AQ9Y5Y9 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SCN10AQ9Y5Y9 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SCN10AQ9Y5Y9 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SCN10AQ9Y5Y9 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
SCN10AQ9Y5Y9 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC23■■□□□ 1.27
SCN10AQ9Y5Y9 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC23■■□□□ 1.27
SCN10AQ9Y5Y9 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SCN10AQ9Y5Y9 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC23■■□□□ 1.27
SCN10AQ9Y5Y9 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms