Protein–RNA interactions for Protein: Q9Y4Y9

LSM5, U6 snRNA-associated Sm-like protein LSm5, humanhuman

Known RBP Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5Q9Y4Y9 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LSM5Q9Y4Y9 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM5Q9Y4Y9 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.15■□□□□ 0.34
LSM5Q9Y4Y9 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
LSM5Q9Y4Y9 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LSM5Q9Y4Y9 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM5Q9Y4Y9 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.15■□□□□ 0.34
LSM5Q9Y4Y9 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
LSM5Q9Y4Y9 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSM5Q9Y4Y9 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.14■□□□□ 0.33
LSM5Q9Y4Y9 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSM5Q9Y4Y9 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSM5Q9Y4Y9 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.14■□□□□ 0.33
LSM5Q9Y4Y9 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSM5Q9Y4Y9 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSM5Q9Y4Y9 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSM5Q9Y4Y9 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSM5Q9Y4Y9 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LSM5Q9Y4Y9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LSM5Q9Y4Y9 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LSM5Q9Y4Y9 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
LSM5Q9Y4Y9 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSM5Q9Y4Y9 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC17.14■□□□□ 0.33
LSM5Q9Y4Y9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.14■□□□□ 0.33
LSM5Q9Y4Y9 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.14■□□□□ 0.33
LSM5Q9Y4Y9 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LSM5Q9Y4Y9 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.14■□□□□ 0.33
LSM5Q9Y4Y9 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
LSM5Q9Y4Y9 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
LSM5Q9Y4Y9 AC137630.3-201ENST00000607245 391 ntBASIC17.14■□□□□ 0.33
LSM5Q9Y4Y9 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC17.14■□□□□ 0.33
LSM5Q9Y4Y9 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.14■□□□□ 0.33
LSM5Q9Y4Y9 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSM5Q9Y4Y9 AC027702.1-201ENST00000563810 1770 ntBASIC17.14■□□□□ 0.33
LSM5Q9Y4Y9 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LSM5Q9Y4Y9 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LSM5Q9Y4Y9 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSM5Q9Y4Y9 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSM5Q9Y4Y9 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSM5Q9Y4Y9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSM5Q9Y4Y9 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSM5Q9Y4Y9 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
LSM5Q9Y4Y9 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSM5Q9Y4Y9 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSM5Q9Y4Y9 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.13■□□□□ 0.33
LSM5Q9Y4Y9 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LSM5Q9Y4Y9 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSM5Q9Y4Y9 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LSM5Q9Y4Y9 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LSM5Q9Y4Y9 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
LSM5Q9Y4Y9 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC17.13■□□□□ 0.33
LSM5Q9Y4Y9 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LSM5Q9Y4Y9 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LSM5Q9Y4Y9 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
LSM5Q9Y4Y9 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.13■□□□□ 0.33
LSM5Q9Y4Y9 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSM5Q9Y4Y9 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LSM5Q9Y4Y9 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
LSM5Q9Y4Y9 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LSM5Q9Y4Y9 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSM5Q9Y4Y9 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSM5Q9Y4Y9 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSM5Q9Y4Y9 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSM5Q9Y4Y9 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSM5Q9Y4Y9 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LSM5Q9Y4Y9 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSM5Q9Y4Y9 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSM5Q9Y4Y9 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSM5Q9Y4Y9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSM5Q9Y4Y9 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSM5Q9Y4Y9 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
LSM5Q9Y4Y9 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSM5Q9Y4Y9 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSM5Q9Y4Y9 MIR4508-201ENST00000584178 70 ntBASIC17.12■□□□□ 0.33
LSM5Q9Y4Y9 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.12■□□□□ 0.33
LSM5Q9Y4Y9 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.12■□□□□ 0.33
LSM5Q9Y4Y9 AC112907.3-201ENST00000577781 2400 ntBASIC17.12■□□□□ 0.33
LSM5Q9Y4Y9 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSM5Q9Y4Y9 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LSM5Q9Y4Y9 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.12■□□□□ 0.33
LSM5Q9Y4Y9 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSM5Q9Y4Y9 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSM5Q9Y4Y9 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSM5Q9Y4Y9 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSM5Q9Y4Y9 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LSM5Q9Y4Y9 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSM5Q9Y4Y9 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LSM5Q9Y4Y9 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LSM5Q9Y4Y9 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.11■□□□□ 0.33
LSM5Q9Y4Y9 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.11■□□□□ 0.33
LSM5Q9Y4Y9 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSM5Q9Y4Y9 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LSM5Q9Y4Y9 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSM5Q9Y4Y9 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.11■□□□□ 0.33
LSM5Q9Y4Y9 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSM5Q9Y4Y9 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSM5Q9Y4Y9 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.11■□□□□ 0.33
LSM5Q9Y4Y9 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LSM5Q9Y4Y9 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LSM5Q9Y4Y9 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms