Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC23.54■■□□□ 1.36
KDM3AQ9Y4C1 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.54■■□□□ 1.36
KDM3AQ9Y4C1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
KDM3AQ9Y4C1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
KDM3AQ9Y4C1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
KDM3AQ9Y4C1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC23.53■■□□□ 1.36
KDM3AQ9Y4C1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC23.53■■□□□ 1.36
KDM3AQ9Y4C1 GPX1P1-201ENST00000388829 606 ntBASIC23.53■■□□□ 1.36
KDM3AQ9Y4C1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.53■■□□□ 1.36
KDM3AQ9Y4C1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.53■■□□□ 1.36
KDM3AQ9Y4C1 AL050303.2-201ENST00000619798 666 ntBASIC23.53■■□□□ 1.36
KDM3AQ9Y4C1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.53■■□□□ 1.36
KDM3AQ9Y4C1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
KDM3AQ9Y4C1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
KDM3AQ9Y4C1 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
KDM3AQ9Y4C1 AC007375.3-201ENST00000600936 2314 ntBASIC23.52■■□□□ 1.36
KDM3AQ9Y4C1 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
KDM3AQ9Y4C1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
KDM3AQ9Y4C1 FEM1AP4-201ENST00000443167 1987 ntBASIC23.52■■□□□ 1.36
KDM3AQ9Y4C1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
KDM3AQ9Y4C1 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
KDM3AQ9Y4C1 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.52■■□□□ 1.36
KDM3AQ9Y4C1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
KDM3AQ9Y4C1 AC061975.6-201ENST00000579045 1553 ntBASIC23.52■■□□□ 1.36
KDM3AQ9Y4C1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC23.52■■□□□ 1.36
KDM3AQ9Y4C1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
KDM3AQ9Y4C1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
KDM3AQ9Y4C1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
KDM3AQ9Y4C1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
KDM3AQ9Y4C1 CLDN5-201ENST00000403084 2357 ntBASIC23.51■■□□□ 1.35
KDM3AQ9Y4C1 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
KDM3AQ9Y4C1 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
KDM3AQ9Y4C1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
KDM3AQ9Y4C1 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
KDM3AQ9Y4C1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC23.51■■□□□ 1.35
KDM3AQ9Y4C1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.51■■□□□ 1.35
KDM3AQ9Y4C1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC23.51■■□□□ 1.35
KDM3AQ9Y4C1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.51■■□□□ 1.35
KDM3AQ9Y4C1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
KDM3AQ9Y4C1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.51■■□□□ 1.35
KDM3AQ9Y4C1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
KDM3AQ9Y4C1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
KDM3AQ9Y4C1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
KDM3AQ9Y4C1 AL024507.2-201ENST00000606070 2574 ntBASIC23.5■■□□□ 1.35
KDM3AQ9Y4C1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
KDM3AQ9Y4C1 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC23.5■■□□□ 1.35
KDM3AQ9Y4C1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
KDM3AQ9Y4C1 AC007322.1-201ENST00000426983 750 ntBASIC23.5■■□□□ 1.35
KDM3AQ9Y4C1 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC23.5■■□□□ 1.35
KDM3AQ9Y4C1 AC120498.10-201ENST00000621827 505 ntBASIC23.5■■□□□ 1.35
KDM3AQ9Y4C1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
KDM3AQ9Y4C1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC23.5■■□□□ 1.35
KDM3AQ9Y4C1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC23.5■■□□□ 1.35
KDM3AQ9Y4C1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC23.49■■□□□ 1.35
KDM3AQ9Y4C1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.49■■□□□ 1.35
KDM3AQ9Y4C1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
KDM3AQ9Y4C1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
KDM3AQ9Y4C1 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
KDM3AQ9Y4C1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC23.49■■□□□ 1.35
KDM3AQ9Y4C1 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
KDM3AQ9Y4C1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
KDM3AQ9Y4C1 AL121832.2-201ENST00000610979 668 ntBASIC23.49■■□□□ 1.35
KDM3AQ9Y4C1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC23.49■■□□□ 1.35
KDM3AQ9Y4C1 KRT16P2-201ENST00000414673 1423 ntBASIC23.49■■□□□ 1.35
KDM3AQ9Y4C1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
KDM3AQ9Y4C1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
KDM3AQ9Y4C1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
KDM3AQ9Y4C1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
KDM3AQ9Y4C1 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC23.48■■□□□ 1.35
KDM3AQ9Y4C1 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
KDM3AQ9Y4C1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
KDM3AQ9Y4C1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
KDM3AQ9Y4C1 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.48■■□□□ 1.35
KDM3AQ9Y4C1 SLC7A5P1-201ENST00000568957 537 ntBASIC23.48■■□□□ 1.35
KDM3AQ9Y4C1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
KDM3AQ9Y4C1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
KDM3AQ9Y4C1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
KDM3AQ9Y4C1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC23.48■■□□□ 1.35
KDM3AQ9Y4C1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.48■■□□□ 1.35
KDM3AQ9Y4C1 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
KDM3AQ9Y4C1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
KDM3AQ9Y4C1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
KDM3AQ9Y4C1 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
KDM3AQ9Y4C1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
KDM3AQ9Y4C1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23.47■■□□□ 1.35
KDM3AQ9Y4C1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
KDM3AQ9Y4C1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
KDM3AQ9Y4C1 AL355802.2-201ENST00000402069 882 ntBASIC23.47■■□□□ 1.35
KDM3AQ9Y4C1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC23.47■■□□□ 1.35
KDM3AQ9Y4C1 AC142086.2-201ENST00000569753 217 ntBASIC23.47■■□□□ 1.35
KDM3AQ9Y4C1 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.47■■□□□ 1.35
KDM3AQ9Y4C1 AC005181.1-201ENST00000604782 1256 ntBASIC23.47■■□□□ 1.35
KDM3AQ9Y4C1 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.47■■□□□ 1.35
KDM3AQ9Y4C1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.47■■□□□ 1.35
KDM3AQ9Y4C1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
KDM3AQ9Y4C1 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
KDM3AQ9Y4C1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
KDM3AQ9Y4C1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
KDM3AQ9Y4C1 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC23.46■■□□□ 1.35
KDM3AQ9Y4C1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms