Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
RCL1Q9Y2P8 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RCL1Q9Y2P8 AC020907.5-201ENST00000624372 1936 ntBASIC17.02■□□□□ 0.31
RCL1Q9Y2P8 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RCL1Q9Y2P8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RCL1Q9Y2P8 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RCL1Q9Y2P8 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
RCL1Q9Y2P8 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RCL1Q9Y2P8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
RCL1Q9Y2P8 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RCL1Q9Y2P8 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.01■□□□□ 0.31
RCL1Q9Y2P8 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
RCL1Q9Y2P8 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RCL1Q9Y2P8 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RCL1Q9Y2P8 BX664725.1-201ENST00000438252 379 ntBASIC17.01■□□□□ 0.31
RCL1Q9Y2P8 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RCL1Q9Y2P8 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RCL1Q9Y2P8 AL034346.1-201ENST00000568244 1277 ntBASIC17.01■□□□□ 0.31
RCL1Q9Y2P8 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RCL1Q9Y2P8 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.01■□□□□ 0.31
RCL1Q9Y2P8 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.01■□□□□ 0.31
RCL1Q9Y2P8 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RCL1Q9Y2P8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.01■□□□□ 0.31
RCL1Q9Y2P8 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RCL1Q9Y2P8 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RCL1Q9Y2P8 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RCL1Q9Y2P8 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RCL1Q9Y2P8 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RCL1Q9Y2P8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.01■□□□□ 0.31
RCL1Q9Y2P8 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RCL1Q9Y2P8 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RCL1Q9Y2P8 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RCL1Q9Y2P8 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RCL1Q9Y2P8 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RCL1Q9Y2P8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RCL1Q9Y2P8 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17■□□□□ 0.31
RCL1Q9Y2P8 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
RCL1Q9Y2P8 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RCL1Q9Y2P8 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17■□□□□ 0.31
RCL1Q9Y2P8 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17■□□□□ 0.31
RCL1Q9Y2P8 HES6-204ENST00000409182 863 ntTSL 2 BASIC17■□□□□ 0.31
RCL1Q9Y2P8 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17■□□□□ 0.31
RCL1Q9Y2P8 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
RCL1Q9Y2P8 AC068587.7-201ENST00000641602 218 ntBASIC17■□□□□ 0.31
RCL1Q9Y2P8 BID-204ENST00000399767 2129 ntTSL 2 BASIC17■□□□□ 0.31
RCL1Q9Y2P8 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17■□□□□ 0.31
RCL1Q9Y2P8 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RCL1Q9Y2P8 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RCL1Q9Y2P8 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RCL1Q9Y2P8 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RCL1Q9Y2P8 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RCL1Q9Y2P8 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RCL1Q9Y2P8 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RCL1Q9Y2P8 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17■□□□□ 0.31
RCL1Q9Y2P8 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RCL1Q9Y2P8 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RCL1Q9Y2P8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17■□□□□ 0.31
RCL1Q9Y2P8 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RCL1Q9Y2P8 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
RCL1Q9Y2P8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RCL1Q9Y2P8 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RCL1Q9Y2P8 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RCL1Q9Y2P8 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RCL1Q9Y2P8 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RCL1Q9Y2P8 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RCL1Q9Y2P8 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
RCL1Q9Y2P8 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RCL1Q9Y2P8 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RCL1Q9Y2P8 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
RCL1Q9Y2P8 TFPT-201ENST00000391757 774 ntTSL 5 BASIC16.99■□□□□ 0.31
RCL1Q9Y2P8 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RCL1Q9Y2P8 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RCL1Q9Y2P8 AC092028.1-203ENST00000608262 953 ntBASIC16.99■□□□□ 0.31
RCL1Q9Y2P8 AC087239.1-201ENST00000622671 572 ntBASIC16.99■□□□□ 0.31
RCL1Q9Y2P8 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RCL1Q9Y2P8 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.99■□□□□ 0.31
RCL1Q9Y2P8 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RCL1Q9Y2P8 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.99■□□□□ 0.31
RCL1Q9Y2P8 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RCL1Q9Y2P8 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.99■□□□□ 0.31
RCL1Q9Y2P8 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.99■□□□□ 0.31
RCL1Q9Y2P8 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RCL1Q9Y2P8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RCL1Q9Y2P8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.99■□□□□ 0.31
RCL1Q9Y2P8 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.98■□□□□ 0.31
RCL1Q9Y2P8 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RCL1Q9Y2P8 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RCL1Q9Y2P8 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.98■□□□□ 0.31
RCL1Q9Y2P8 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RCL1Q9Y2P8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.98■□□□□ 0.31
RCL1Q9Y2P8 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC16.98■□□□□ 0.31
RCL1Q9Y2P8 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC16.98■□□□□ 0.31
RCL1Q9Y2P8 MTDHP2-201ENST00000601468 714 ntBASIC16.98■□□□□ 0.31
RCL1Q9Y2P8 AC112907.3-201ENST00000577781 2400 ntBASIC16.98■□□□□ 0.31
RCL1Q9Y2P8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.98■□□□□ 0.31
RCL1Q9Y2P8 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RCL1Q9Y2P8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RCL1Q9Y2P8 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
RCL1Q9Y2P8 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.97■□□□□ 0.31
RCL1Q9Y2P8 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms